Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.46■■□□□ 1.03
Scn5aQ9JJV9 Gm27405-201ENSMUST00000184201 112 ntBASIC21.46■■□□□ 1.03
Scn5aQ9JJV9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn5aQ9JJV9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.46■■□□□ 1.03
Scn5aQ9JJV9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn5aQ9JJV9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn5aQ9JJV9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn5aQ9JJV9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn5aQ9JJV9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn5aQ9JJV9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn5aQ9JJV9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn5aQ9JJV9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.46■■□□□ 1.03
Scn5aQ9JJV9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Scn5aQ9JJV9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.46■■□□□ 1.03
Scn5aQ9JJV9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Scn5aQ9JJV9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn5aQ9JJV9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.45■■□□□ 1.02
Scn5aQ9JJV9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.45■■□□□ 1.02
Scn5aQ9JJV9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn5aQ9JJV9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn5aQ9JJV9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.45■■□□□ 1.02
Scn5aQ9JJV9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Scn5aQ9JJV9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn5aQ9JJV9 Smad6-203ENSMUST00000179458 273 ntBASIC21.45■■□□□ 1.02
Scn5aQ9JJV9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn5aQ9JJV9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn5aQ9JJV9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn5aQ9JJV9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn5aQ9JJV9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
Scn5aQ9JJV9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn5aQ9JJV9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn5aQ9JJV9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn5aQ9JJV9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Scn5aQ9JJV9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn5aQ9JJV9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Scn5aQ9JJV9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn5aQ9JJV9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Scn5aQ9JJV9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn5aQ9JJV9 Gm37179-201ENSMUST00000194862 823 ntBASIC21.43■■□□□ 1.02
Scn5aQ9JJV9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Scn5aQ9JJV9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Scn5aQ9JJV9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scn5aQ9JJV9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scn5aQ9JJV9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scn5aQ9JJV9 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.42■■□□□ 1.02
Scn5aQ9JJV9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.41■■□□□ 1.02
Scn5aQ9JJV9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn5aQ9JJV9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn5aQ9JJV9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Scn5aQ9JJV9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn5aQ9JJV9 Gm42569-201ENSMUST00000200539 472 ntBASIC21.41■■□□□ 1.02
Scn5aQ9JJV9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn5aQ9JJV9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn5aQ9JJV9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Scn5aQ9JJV9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn5aQ9JJV9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn5aQ9JJV9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scn5aQ9JJV9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scn5aQ9JJV9 Gm10033-202ENSMUST00000211874 928 ntBASIC21.4■■□□□ 1.02
Scn5aQ9JJV9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn5aQ9JJV9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scn5aQ9JJV9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn5aQ9JJV9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scn5aQ9JJV9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Scn5aQ9JJV9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.39■■□□□ 1.02
Scn5aQ9JJV9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Scn5aQ9JJV9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Scn5aQ9JJV9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Scn5aQ9JJV9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Scn5aQ9JJV9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scn5aQ9JJV9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.39■■□□□ 1.01
Scn5aQ9JJV9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scn5aQ9JJV9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.39■■□□□ 1.01
Scn5aQ9JJV9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scn5aQ9JJV9 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.39■■□□□ 1.01
Scn5aQ9JJV9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scn5aQ9JJV9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scn5aQ9JJV9 Gm42642-201ENSMUST00000200683 355 ntBASIC21.38■■□□□ 1.01
Scn5aQ9JJV9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
Scn5aQ9JJV9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Scn5aQ9JJV9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scn5aQ9JJV9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Scn5aQ9JJV9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.37■■□□□ 1.01
Scn5aQ9JJV9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Scn5aQ9JJV9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn5aQ9JJV9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Scn5aQ9JJV9 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.36■■□□□ 1.01
Scn5aQ9JJV9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn5aQ9JJV9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.36■■□□□ 1.01
Scn5aQ9JJV9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.36■■□□□ 1.01
Scn5aQ9JJV9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scn5aQ9JJV9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn5aQ9JJV9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scn5aQ9JJV9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Scn5aQ9JJV9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Scn5aQ9JJV9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn5aQ9JJV9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.35■■□□□ 1.01
Scn5aQ9JJV9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Scn5aQ9JJV9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Scn5aQ9JJV9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms