Protein–RNA interactions for Protein: Q9ER99

Rsc1a1, Regulatory solute carrier protein family 1 member 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsc1a1Q9ER99 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rsc1a1Q9ER99 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rsc1a1Q9ER99 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rsc1a1Q9ER99 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rsc1a1Q9ER99 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rsc1a1Q9ER99 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rsc1a1Q9ER99 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rsc1a1Q9ER99 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rsc1a1Q9ER99 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.09■□□□□ 0.81
Rsc1a1Q9ER99 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rsc1a1Q9ER99 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.09■□□□□ 0.81
Rsc1a1Q9ER99 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rsc1a1Q9ER99 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rsc1a1Q9ER99 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rsc1a1Q9ER99 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rsc1a1Q9ER99 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rsc1a1Q9ER99 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Rsc1a1Q9ER99 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rsc1a1Q9ER99 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.08■□□□□ 0.81
Rsc1a1Q9ER99 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rsc1a1Q9ER99 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rsc1a1Q9ER99 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rsc1a1Q9ER99 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rsc1a1Q9ER99 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.08■□□□□ 0.8
Rsc1a1Q9ER99 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rsc1a1Q9ER99 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rsc1a1Q9ER99 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rsc1a1Q9ER99 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.07■□□□□ 0.8
Rsc1a1Q9ER99 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.07■□□□□ 0.8
Rsc1a1Q9ER99 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rsc1a1Q9ER99 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rsc1a1Q9ER99 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rsc1a1Q9ER99 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rsc1a1Q9ER99 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rsc1a1Q9ER99 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rsc1a1Q9ER99 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rsc1a1Q9ER99 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rsc1a1Q9ER99 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rsc1a1Q9ER99 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rsc1a1Q9ER99 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rsc1a1Q9ER99 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rsc1a1Q9ER99 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.05■□□□□ 0.8
Rsc1a1Q9ER99 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rsc1a1Q9ER99 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rsc1a1Q9ER99 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rsc1a1Q9ER99 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rsc1a1Q9ER99 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rsc1a1Q9ER99 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Rsc1a1Q9ER99 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rsc1a1Q9ER99 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rsc1a1Q9ER99 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rsc1a1Q9ER99 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.04■□□□□ 0.8
Rsc1a1Q9ER99 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rsc1a1Q9ER99 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.04■□□□□ 0.8
Rsc1a1Q9ER99 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rsc1a1Q9ER99 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rsc1a1Q9ER99 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rsc1a1Q9ER99 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.04■□□□□ 0.8
Rsc1a1Q9ER99 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rsc1a1Q9ER99 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rsc1a1Q9ER99 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rsc1a1Q9ER99 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rsc1a1Q9ER99 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rsc1a1Q9ER99 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.03■□□□□ 0.8
Rsc1a1Q9ER99 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rsc1a1Q9ER99 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rsc1a1Q9ER99 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rsc1a1Q9ER99 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rsc1a1Q9ER99 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rsc1a1Q9ER99 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rsc1a1Q9ER99 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rsc1a1Q9ER99 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Rsc1a1Q9ER99 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.02■□□□□ 0.79
Rsc1a1Q9ER99 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rsc1a1Q9ER99 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rsc1a1Q9ER99 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rsc1a1Q9ER99 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rsc1a1Q9ER99 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rsc1a1Q9ER99 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rsc1a1Q9ER99 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rsc1a1Q9ER99 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.01■□□□□ 0.79
Rsc1a1Q9ER99 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.01■□□□□ 0.79
Rsc1a1Q9ER99 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rsc1a1Q9ER99 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rsc1a1Q9ER99 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rsc1a1Q9ER99 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20■□□□□ 0.79
Rsc1a1Q9ER99 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rsc1a1Q9ER99 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rsc1a1Q9ER99 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rsc1a1Q9ER99 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rsc1a1Q9ER99 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rsc1a1Q9ER99 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rsc1a1Q9ER99 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rsc1a1Q9ER99 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rsc1a1Q9ER99 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rsc1a1Q9ER99 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rsc1a1Q9ER99 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rsc1a1Q9ER99 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.99■□□□□ 0.79
Rsc1a1Q9ER99 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rsc1a1Q9ER99 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms