Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Nif3l1Q9EQ80 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nif3l1Q9EQ80 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Nif3l1Q9EQ80 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nif3l1Q9EQ80 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.31■□□□□ 0.84
Nif3l1Q9EQ80 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nif3l1Q9EQ80 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nif3l1Q9EQ80 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nif3l1Q9EQ80 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.31■□□□□ 0.84
Nif3l1Q9EQ80 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nif3l1Q9EQ80 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Nif3l1Q9EQ80 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nif3l1Q9EQ80 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Nif3l1Q9EQ80 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nif3l1Q9EQ80 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.3■□□□□ 0.84
Nif3l1Q9EQ80 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nif3l1Q9EQ80 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Nif3l1Q9EQ80 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.3■□□□□ 0.84
Nif3l1Q9EQ80 Gm22238-201ENSMUST00000175222 88 ntBASIC20.3■□□□□ 0.84
Nif3l1Q9EQ80 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nif3l1Q9EQ80 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nif3l1Q9EQ80 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nif3l1Q9EQ80 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nif3l1Q9EQ80 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.29■□□□□ 0.84
Nif3l1Q9EQ80 Gm7143-201ENSMUST00000222811 859 ntBASIC20.29■□□□□ 0.84
Nif3l1Q9EQ80 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nif3l1Q9EQ80 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nif3l1Q9EQ80 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nif3l1Q9EQ80 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nif3l1Q9EQ80 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nif3l1Q9EQ80 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nif3l1Q9EQ80 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.28■□□□□ 0.84
Nif3l1Q9EQ80 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nif3l1Q9EQ80 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.28■□□□□ 0.84
Nif3l1Q9EQ80 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Nif3l1Q9EQ80 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.28■□□□□ 0.84
Nif3l1Q9EQ80 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nif3l1Q9EQ80 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nif3l1Q9EQ80 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nif3l1Q9EQ80 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nif3l1Q9EQ80 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nif3l1Q9EQ80 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nif3l1Q9EQ80 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nif3l1Q9EQ80 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.27■□□□□ 0.84
Nif3l1Q9EQ80 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nif3l1Q9EQ80 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nif3l1Q9EQ80 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.27■□□□□ 0.84
Nif3l1Q9EQ80 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Nif3l1Q9EQ80 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nif3l1Q9EQ80 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Nif3l1Q9EQ80 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nif3l1Q9EQ80 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.26■□□□□ 0.83
Nif3l1Q9EQ80 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nif3l1Q9EQ80 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nif3l1Q9EQ80 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nif3l1Q9EQ80 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nif3l1Q9EQ80 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Nif3l1Q9EQ80 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nif3l1Q9EQ80 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
Nif3l1Q9EQ80 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.25■□□□□ 0.83
Nif3l1Q9EQ80 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Nif3l1Q9EQ80 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Nif3l1Q9EQ80 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nif3l1Q9EQ80 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nif3l1Q9EQ80 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
Nif3l1Q9EQ80 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nif3l1Q9EQ80 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nif3l1Q9EQ80 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nif3l1Q9EQ80 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Nif3l1Q9EQ80 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nif3l1Q9EQ80 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.23■□□□□ 0.83
Nif3l1Q9EQ80 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nif3l1Q9EQ80 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nif3l1Q9EQ80 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nif3l1Q9EQ80 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nif3l1Q9EQ80 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nif3l1Q9EQ80 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.22■□□□□ 0.83
Nif3l1Q9EQ80 Gm9870-201ENSMUST00000063874 645 ntBASIC20.22■□□□□ 0.83
Nif3l1Q9EQ80 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.22■□□□□ 0.83
Nif3l1Q9EQ80 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Nif3l1Q9EQ80 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nif3l1Q9EQ80 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nif3l1Q9EQ80 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nif3l1Q9EQ80 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nif3l1Q9EQ80 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Nif3l1Q9EQ80 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nif3l1Q9EQ80 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nif3l1Q9EQ80 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nif3l1Q9EQ80 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nif3l1Q9EQ80 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nif3l1Q9EQ80 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Nif3l1Q9EQ80 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nif3l1Q9EQ80 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nif3l1Q9EQ80 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.2■□□□□ 0.82
Nif3l1Q9EQ80 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nif3l1Q9EQ80 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nif3l1Q9EQ80 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nif3l1Q9EQ80 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.2■□□□□ 0.82
Nif3l1Q9EQ80 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Nif3l1Q9EQ80 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms