Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cir1Q9DA19 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cir1Q9DA19 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cir1Q9DA19 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cir1Q9DA19 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cir1Q9DA19 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cir1Q9DA19 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cir1Q9DA19 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cir1Q9DA19 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.57■□□□□ 0.4
Cir1Q9DA19 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.57■□□□□ 0.4
Cir1Q9DA19 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.57■□□□□ 0.4
Cir1Q9DA19 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.57■□□□□ 0.4
Cir1Q9DA19 Rps24-207ENSMUST00000224568 714 ntBASIC17.57■□□□□ 0.4
Cir1Q9DA19 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cir1Q9DA19 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.57■□□□□ 0.4
Cir1Q9DA19 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.57■□□□□ 0.4
Cir1Q9DA19 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cir1Q9DA19 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cir1Q9DA19 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cir1Q9DA19 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cir1Q9DA19 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cir1Q9DA19 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cir1Q9DA19 Gm45444-201ENSMUST00000211394 898 ntBASIC17.56■□□□□ 0.4
Cir1Q9DA19 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cir1Q9DA19 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cir1Q9DA19 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cir1Q9DA19 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cir1Q9DA19 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cir1Q9DA19 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cir1Q9DA19 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cir1Q9DA19 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.55■□□□□ 0.4
Cir1Q9DA19 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cir1Q9DA19 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cir1Q9DA19 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Cir1Q9DA19 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.55■□□□□ 0.4
Cir1Q9DA19 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cir1Q9DA19 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cir1Q9DA19 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cir1Q9DA19 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cir1Q9DA19 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cir1Q9DA19 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cir1Q9DA19 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.54■□□□□ 0.4
Cir1Q9DA19 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cir1Q9DA19 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cir1Q9DA19 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cir1Q9DA19 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cir1Q9DA19 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cir1Q9DA19 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cir1Q9DA19 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.53■□□□□ 0.4
Cir1Q9DA19 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.53■□□□□ 0.4
Cir1Q9DA19 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cir1Q9DA19 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cir1Q9DA19 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cir1Q9DA19 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cir1Q9DA19 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cir1Q9DA19 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cir1Q9DA19 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cir1Q9DA19 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cir1Q9DA19 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cir1Q9DA19 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.52■□□□□ 0.4
Cir1Q9DA19 Gm15820-201ENSMUST00000201566 728 ntBASIC17.52■□□□□ 0.4
Cir1Q9DA19 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.52■□□□□ 0.4
Cir1Q9DA19 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cir1Q9DA19 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cir1Q9DA19 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cir1Q9DA19 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cir1Q9DA19 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cir1Q9DA19 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cir1Q9DA19 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cir1Q9DA19 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cir1Q9DA19 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cir1Q9DA19 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cir1Q9DA19 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cir1Q9DA19 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cir1Q9DA19 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cir1Q9DA19 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cir1Q9DA19 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cir1Q9DA19 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cir1Q9DA19 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cir1Q9DA19 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cir1Q9DA19 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.5■□□□□ 0.39
Cir1Q9DA19 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cir1Q9DA19 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cir1Q9DA19 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Cir1Q9DA19 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cir1Q9DA19 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cir1Q9DA19 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cir1Q9DA19 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cir1Q9DA19 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cir1Q9DA19 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cir1Q9DA19 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cir1Q9DA19 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cir1Q9DA19 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cir1Q9DA19 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.49■□□□□ 0.39
Cir1Q9DA19 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cir1Q9DA19 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cir1Q9DA19 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cir1Q9DA19 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.48■□□□□ 0.39
Cir1Q9DA19 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.48■□□□□ 0.39
Cir1Q9DA19 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms