Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.56■□□□□ 0.56
Upk3bl1Q9D701 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Upk3bl1Q9D701 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upk3bl1Q9D701 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upk3bl1Q9D701 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk3bl1Q9D701 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk3bl1Q9D701 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.55■□□□□ 0.56
Upk3bl1Q9D701 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk3bl1Q9D701 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Upk3bl1Q9D701 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Upk3bl1Q9D701 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk3bl1Q9D701 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk3bl1Q9D701 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk3bl1Q9D701 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk3bl1Q9D701 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk3bl1Q9D701 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk3bl1Q9D701 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk3bl1Q9D701 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.55■□□□□ 0.56
Upk3bl1Q9D701 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Upk3bl1Q9D701 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.54■□□□□ 0.56
Upk3bl1Q9D701 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Upk3bl1Q9D701 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upk3bl1Q9D701 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upk3bl1Q9D701 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Upk3bl1Q9D701 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upk3bl1Q9D701 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upk3bl1Q9D701 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upk3bl1Q9D701 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upk3bl1Q9D701 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upk3bl1Q9D701 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upk3bl1Q9D701 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upk3bl1Q9D701 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upk3bl1Q9D701 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upk3bl1Q9D701 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upk3bl1Q9D701 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upk3bl1Q9D701 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.53■□□□□ 0.56
Upk3bl1Q9D701 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.53■□□□□ 0.56
Upk3bl1Q9D701 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.53■□□□□ 0.56
Upk3bl1Q9D701 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Upk3bl1Q9D701 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.53■□□□□ 0.56
Upk3bl1Q9D701 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upk3bl1Q9D701 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Upk3bl1Q9D701 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upk3bl1Q9D701 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Upk3bl1Q9D701 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Upk3bl1Q9D701 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Upk3bl1Q9D701 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Upk3bl1Q9D701 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Upk3bl1Q9D701 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Upk3bl1Q9D701 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Upk3bl1Q9D701 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upk3bl1Q9D701 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Upk3bl1Q9D701 Gm44428-201ENSMUST00000204474 874 ntBASIC18.51■□□□□ 0.55
Upk3bl1Q9D701 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.51■□□□□ 0.55
Upk3bl1Q9D701 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.51■□□□□ 0.55
Upk3bl1Q9D701 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upk3bl1Q9D701 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upk3bl1Q9D701 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk3bl1Q9D701 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk3bl1Q9D701 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Upk3bl1Q9D701 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.5■□□□□ 0.55
Upk3bl1Q9D701 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Upk3bl1Q9D701 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Upk3bl1Q9D701 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk3bl1Q9D701 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk3bl1Q9D701 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk3bl1Q9D701 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bl1Q9D701 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bl1Q9D701 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bl1Q9D701 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bl1Q9D701 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bl1Q9D701 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bl1Q9D701 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bl1Q9D701 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bl1Q9D701 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.49■□□□□ 0.55
Upk3bl1Q9D701 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.49■□□□□ 0.55
Upk3bl1Q9D701 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk3bl1Q9D701 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk3bl1Q9D701 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk3bl1Q9D701 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk3bl1Q9D701 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk3bl1Q9D701 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk3bl1Q9D701 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk3bl1Q9D701 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk3bl1Q9D701 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk3bl1Q9D701 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk3bl1Q9D701 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk3bl1Q9D701 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk3bl1Q9D701 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk3bl1Q9D701 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Upk3bl1Q9D701 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk3bl1Q9D701 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Upk3bl1Q9D701 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk3bl1Q9D701 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk3bl1Q9D701 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk3bl1Q9D701 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upk3bl1Q9D701 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upk3bl1Q9D701 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Upk3bl1Q9D701 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.46■□□□□ 0.55
Upk3bl1Q9D701 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms