Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1bQ9D0N7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1bQ9D0N7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1bQ9D0N7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1bQ9D0N7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chaf1bQ9D0N7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chaf1bQ9D0N7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Chaf1bQ9D0N7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Chaf1bQ9D0N7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chaf1bQ9D0N7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chaf1bQ9D0N7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chaf1bQ9D0N7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Chaf1bQ9D0N7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chaf1bQ9D0N7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1bQ9D0N7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.13■□□□□ 0.65
Chaf1bQ9D0N7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1bQ9D0N7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1bQ9D0N7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Chaf1bQ9D0N7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Chaf1bQ9D0N7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1bQ9D0N7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1bQ9D0N7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.12■□□□□ 0.65
Chaf1bQ9D0N7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Chaf1bQ9D0N7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chaf1bQ9D0N7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chaf1bQ9D0N7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chaf1bQ9D0N7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chaf1bQ9D0N7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chaf1bQ9D0N7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chaf1bQ9D0N7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.12■□□□□ 0.65
Chaf1bQ9D0N7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chaf1bQ9D0N7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chaf1bQ9D0N7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chaf1bQ9D0N7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.11■□□□□ 0.65
Chaf1bQ9D0N7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Chaf1bQ9D0N7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chaf1bQ9D0N7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Chaf1bQ9D0N7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Chaf1bQ9D0N7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chaf1bQ9D0N7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chaf1bQ9D0N7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chaf1bQ9D0N7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Chaf1bQ9D0N7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chaf1bQ9D0N7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Chaf1bQ9D0N7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chaf1bQ9D0N7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.1■□□□□ 0.65
Chaf1bQ9D0N7 Gm27502-201ENSMUST00000183495 199 ntBASIC19.1■□□□□ 0.65
Chaf1bQ9D0N7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chaf1bQ9D0N7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chaf1bQ9D0N7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chaf1bQ9D0N7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chaf1bQ9D0N7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chaf1bQ9D0N7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chaf1bQ9D0N7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chaf1bQ9D0N7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Chaf1bQ9D0N7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chaf1bQ9D0N7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.09■□□□□ 0.65
Chaf1bQ9D0N7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chaf1bQ9D0N7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.09■□□□□ 0.65
Chaf1bQ9D0N7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chaf1bQ9D0N7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Chaf1bQ9D0N7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chaf1bQ9D0N7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chaf1bQ9D0N7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chaf1bQ9D0N7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chaf1bQ9D0N7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Chaf1bQ9D0N7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chaf1bQ9D0N7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chaf1bQ9D0N7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chaf1bQ9D0N7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Chaf1bQ9D0N7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Chaf1bQ9D0N7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chaf1bQ9D0N7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Chaf1bQ9D0N7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Chaf1bQ9D0N7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chaf1bQ9D0N7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chaf1bQ9D0N7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chaf1bQ9D0N7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chaf1bQ9D0N7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chaf1bQ9D0N7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.07■□□□□ 0.64
Chaf1bQ9D0N7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chaf1bQ9D0N7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Chaf1bQ9D0N7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chaf1bQ9D0N7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Chaf1bQ9D0N7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chaf1bQ9D0N7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chaf1bQ9D0N7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chaf1bQ9D0N7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chaf1bQ9D0N7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chaf1bQ9D0N7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Chaf1bQ9D0N7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chaf1bQ9D0N7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chaf1bQ9D0N7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.06■□□□□ 0.64
Chaf1bQ9D0N7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.05■□□□□ 0.64
Chaf1bQ9D0N7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chaf1bQ9D0N7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.05■□□□□ 0.64
Chaf1bQ9D0N7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chaf1bQ9D0N7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chaf1bQ9D0N7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Chaf1bQ9D0N7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 119.7 ms