Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Shmt2Q9CZN7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shmt2Q9CZN7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.46■□□□□ 0.71
Shmt2Q9CZN7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Shmt2Q9CZN7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Shmt2Q9CZN7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Shmt2Q9CZN7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.46■□□□□ 0.71
Shmt2Q9CZN7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Shmt2Q9CZN7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shmt2Q9CZN7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shmt2Q9CZN7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shmt2Q9CZN7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.45■□□□□ 0.7
Shmt2Q9CZN7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Shmt2Q9CZN7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Shmt2Q9CZN7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shmt2Q9CZN7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shmt2Q9CZN7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shmt2Q9CZN7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shmt2Q9CZN7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.44■□□□□ 0.7
Shmt2Q9CZN7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shmt2Q9CZN7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Shmt2Q9CZN7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shmt2Q9CZN7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shmt2Q9CZN7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shmt2Q9CZN7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shmt2Q9CZN7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shmt2Q9CZN7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Shmt2Q9CZN7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.44■□□□□ 0.7
Shmt2Q9CZN7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shmt2Q9CZN7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shmt2Q9CZN7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shmt2Q9CZN7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Shmt2Q9CZN7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shmt2Q9CZN7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shmt2Q9CZN7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shmt2Q9CZN7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shmt2Q9CZN7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shmt2Q9CZN7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.42■□□□□ 0.7
Shmt2Q9CZN7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shmt2Q9CZN7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.42■□□□□ 0.7
Shmt2Q9CZN7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.42■□□□□ 0.7
Shmt2Q9CZN7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.42■□□□□ 0.7
Shmt2Q9CZN7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shmt2Q9CZN7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Shmt2Q9CZN7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shmt2Q9CZN7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shmt2Q9CZN7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shmt2Q9CZN7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shmt2Q9CZN7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shmt2Q9CZN7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Shmt2Q9CZN7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shmt2Q9CZN7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shmt2Q9CZN7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shmt2Q9CZN7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shmt2Q9CZN7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shmt2Q9CZN7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.41■□□□□ 0.7
Shmt2Q9CZN7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shmt2Q9CZN7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shmt2Q9CZN7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.41■□□□□ 0.7
Shmt2Q9CZN7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shmt2Q9CZN7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shmt2Q9CZN7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shmt2Q9CZN7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shmt2Q9CZN7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shmt2Q9CZN7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Shmt2Q9CZN7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shmt2Q9CZN7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shmt2Q9CZN7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shmt2Q9CZN7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shmt2Q9CZN7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shmt2Q9CZN7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shmt2Q9CZN7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shmt2Q9CZN7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Shmt2Q9CZN7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Shmt2Q9CZN7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Shmt2Q9CZN7 Gm10399-202ENSMUST00000202768 748 ntBASIC19.39■□□□□ 0.69
Shmt2Q9CZN7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shmt2Q9CZN7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shmt2Q9CZN7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shmt2Q9CZN7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shmt2Q9CZN7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shmt2Q9CZN7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shmt2Q9CZN7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shmt2Q9CZN7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Shmt2Q9CZN7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Shmt2Q9CZN7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Shmt2Q9CZN7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.38■□□□□ 0.69
Shmt2Q9CZN7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.38■□□□□ 0.69
Shmt2Q9CZN7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.38■□□□□ 0.69
Shmt2Q9CZN7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shmt2Q9CZN7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shmt2Q9CZN7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shmt2Q9CZN7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shmt2Q9CZN7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.38■□□□□ 0.69
Shmt2Q9CZN7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shmt2Q9CZN7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shmt2Q9CZN7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Shmt2Q9CZN7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Shmt2Q9CZN7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shmt2Q9CZN7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 517.3 ms