Protein–RNA interactions for Protein: Q9CZA6

Nde1, Nuclear distribution protein nudE homolog 1, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nde1Q9CZA6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.82■□□□□ 0.76
Nde1Q9CZA6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nde1Q9CZA6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nde1Q9CZA6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.82■□□□□ 0.76
Nde1Q9CZA6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nde1Q9CZA6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nde1Q9CZA6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nde1Q9CZA6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nde1Q9CZA6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nde1Q9CZA6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nde1Q9CZA6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Nde1Q9CZA6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nde1Q9CZA6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nde1Q9CZA6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Nde1Q9CZA6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Nde1Q9CZA6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nde1Q9CZA6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nde1Q9CZA6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nde1Q9CZA6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nde1Q9CZA6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nde1Q9CZA6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nde1Q9CZA6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nde1Q9CZA6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nde1Q9CZA6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nde1Q9CZA6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nde1Q9CZA6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nde1Q9CZA6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.79■□□□□ 0.76
Nde1Q9CZA6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.79■□□□□ 0.76
Nde1Q9CZA6 Gm9806-201ENSMUST00000051080 552 ntBASIC19.79■□□□□ 0.76
Nde1Q9CZA6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nde1Q9CZA6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nde1Q9CZA6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nde1Q9CZA6 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.78■□□□□ 0.76
Nde1Q9CZA6 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.78■□□□□ 0.76
Nde1Q9CZA6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nde1Q9CZA6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Nde1Q9CZA6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nde1Q9CZA6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.77■□□□□ 0.76
Nde1Q9CZA6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nde1Q9CZA6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nde1Q9CZA6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
Nde1Q9CZA6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nde1Q9CZA6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nde1Q9CZA6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nde1Q9CZA6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nde1Q9CZA6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Nde1Q9CZA6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nde1Q9CZA6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nde1Q9CZA6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nde1Q9CZA6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nde1Q9CZA6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.75■□□□□ 0.75
Nde1Q9CZA6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Nde1Q9CZA6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.75■□□□□ 0.75
Nde1Q9CZA6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nde1Q9CZA6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nde1Q9CZA6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nde1Q9CZA6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.75■□□□□ 0.75
Nde1Q9CZA6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Nde1Q9CZA6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nde1Q9CZA6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nde1Q9CZA6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.75■□□□□ 0.75
Nde1Q9CZA6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nde1Q9CZA6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Nde1Q9CZA6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nde1Q9CZA6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nde1Q9CZA6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nde1Q9CZA6 Scarna2-201ENSMUST00000157560 414 ntBASIC19.74■□□□□ 0.75
Nde1Q9CZA6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nde1Q9CZA6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nde1Q9CZA6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nde1Q9CZA6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nde1Q9CZA6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nde1Q9CZA6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nde1Q9CZA6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Nde1Q9CZA6 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.73■□□□□ 0.75
Nde1Q9CZA6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Nde1Q9CZA6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nde1Q9CZA6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.73■□□□□ 0.75
Nde1Q9CZA6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nde1Q9CZA6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms