Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim13Q9CYB0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim13Q9CYB0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim13Q9CYB0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim13Q9CYB0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim13Q9CYB0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim13Q9CYB0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim13Q9CYB0 Iqck-206ENSMUST00000208658 2891 ntBASIC18.79■□□□□ 0.6
Trim13Q9CYB0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim13Q9CYB0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim13Q9CYB0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim13Q9CYB0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim13Q9CYB0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim13Q9CYB0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim13Q9CYB0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim13Q9CYB0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim13Q9CYB0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim13Q9CYB0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim13Q9CYB0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim13Q9CYB0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim13Q9CYB0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim13Q9CYB0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim13Q9CYB0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim13Q9CYB0 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.77■□□□□ 0.6
Trim13Q9CYB0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim13Q9CYB0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim13Q9CYB0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim13Q9CYB0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim13Q9CYB0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim13Q9CYB0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim13Q9CYB0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.76■□□□□ 0.59
Trim13Q9CYB0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim13Q9CYB0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim13Q9CYB0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim13Q9CYB0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.76■□□□□ 0.59
Trim13Q9CYB0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim13Q9CYB0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim13Q9CYB0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim13Q9CYB0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim13Q9CYB0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim13Q9CYB0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim13Q9CYB0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.75■□□□□ 0.59
Trim13Q9CYB0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trim13Q9CYB0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim13Q9CYB0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim13Q9CYB0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim13Q9CYB0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Trim13Q9CYB0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim13Q9CYB0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim13Q9CYB0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim13Q9CYB0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.74■□□□□ 0.59
Trim13Q9CYB0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim13Q9CYB0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim13Q9CYB0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trim13Q9CYB0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim13Q9CYB0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim13Q9CYB0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Trim13Q9CYB0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trim13Q9CYB0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim13Q9CYB0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim13Q9CYB0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trim13Q9CYB0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim13Q9CYB0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trim13Q9CYB0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trim13Q9CYB0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim13Q9CYB0 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.73■□□□□ 0.59
Trim13Q9CYB0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim13Q9CYB0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trim13Q9CYB0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim13Q9CYB0 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.73■□□□□ 0.59
Trim13Q9CYB0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trim13Q9CYB0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim13Q9CYB0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim13Q9CYB0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim13Q9CYB0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim13Q9CYB0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim13Q9CYB0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim13Q9CYB0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim13Q9CYB0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trim13Q9CYB0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim13Q9CYB0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim13Q9CYB0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim13Q9CYB0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim13Q9CYB0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trim13Q9CYB0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim13Q9CYB0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim13Q9CYB0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim13Q9CYB0 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.71■□□□□ 0.59
Trim13Q9CYB0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Trim13Q9CYB0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim13Q9CYB0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim13Q9CYB0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim13Q9CYB0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trim13Q9CYB0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim13Q9CYB0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim13Q9CYB0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Trim13Q9CYB0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Trim13Q9CYB0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim13Q9CYB0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim13Q9CYB0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms