Protein–RNA interactions for Protein: Q9CTH6

Fcf1, rRNA-processing protein FCF1 homolog, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fcf1Q9CTH6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.6■□□□□ 0.89
Fcf1Q9CTH6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Fcf1Q9CTH6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Fcf1Q9CTH6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Fcf1Q9CTH6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Fcf1Q9CTH6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Fcf1Q9CTH6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Fcf1Q9CTH6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Fcf1Q9CTH6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Fcf1Q9CTH6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Fcf1Q9CTH6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Fcf1Q9CTH6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Fcf1Q9CTH6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fcf1Q9CTH6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fcf1Q9CTH6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fcf1Q9CTH6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fcf1Q9CTH6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fcf1Q9CTH6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Fcf1Q9CTH6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fcf1Q9CTH6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.58■□□□□ 0.89
Fcf1Q9CTH6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.58■□□□□ 0.89
Fcf1Q9CTH6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.58■□□□□ 0.89
Fcf1Q9CTH6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Fcf1Q9CTH6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Fcf1Q9CTH6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Fcf1Q9CTH6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Fcf1Q9CTH6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Fcf1Q9CTH6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.57■□□□□ 0.88
Fcf1Q9CTH6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Fcf1Q9CTH6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Fcf1Q9CTH6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fcf1Q9CTH6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fcf1Q9CTH6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Fcf1Q9CTH6 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.57■□□□□ 0.88
Fcf1Q9CTH6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Fcf1Q9CTH6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fcf1Q9CTH6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Fcf1Q9CTH6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.57■□□□□ 0.88
Fcf1Q9CTH6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Fcf1Q9CTH6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fcf1Q9CTH6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fcf1Q9CTH6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Fcf1Q9CTH6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fcf1Q9CTH6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fcf1Q9CTH6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Fcf1Q9CTH6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fcf1Q9CTH6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fcf1Q9CTH6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fcf1Q9CTH6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Fcf1Q9CTH6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Fcf1Q9CTH6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fcf1Q9CTH6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fcf1Q9CTH6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fcf1Q9CTH6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fcf1Q9CTH6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fcf1Q9CTH6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fcf1Q9CTH6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fcf1Q9CTH6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fcf1Q9CTH6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Fcf1Q9CTH6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fcf1Q9CTH6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Fcf1Q9CTH6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fcf1Q9CTH6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fcf1Q9CTH6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Fcf1Q9CTH6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
Fcf1Q9CTH6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fcf1Q9CTH6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Fcf1Q9CTH6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fcf1Q9CTH6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fcf1Q9CTH6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Fcf1Q9CTH6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fcf1Q9CTH6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fcf1Q9CTH6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Fcf1Q9CTH6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fcf1Q9CTH6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.52■□□□□ 0.88
Fcf1Q9CTH6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Fcf1Q9CTH6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Fcf1Q9CTH6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fcf1Q9CTH6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fcf1Q9CTH6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.51■□□□□ 0.87
Fcf1Q9CTH6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fcf1Q9CTH6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Fcf1Q9CTH6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fcf1Q9CTH6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Fcf1Q9CTH6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fcf1Q9CTH6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fcf1Q9CTH6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Fcf1Q9CTH6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Fcf1Q9CTH6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fcf1Q9CTH6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Fcf1Q9CTH6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Fcf1Q9CTH6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fcf1Q9CTH6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fcf1Q9CTH6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fcf1Q9CTH6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.49■□□□□ 0.87
Fcf1Q9CTH6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Fcf1Q9CTH6 Gm43530-201ENSMUST00000195920 274 ntBASIC20.49■□□□□ 0.87
Fcf1Q9CTH6 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.49■□□□□ 0.87
Fcf1Q9CTH6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fcf1Q9CTH6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms