Protein–RNA interactions for Protein: Q9CR26

Vta1, Vacuolar protein sorting-associated protein VTA1 homolog, mousemouse

Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vta1Q9CR26 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Vta1Q9CR26 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Vta1Q9CR26 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Vta1Q9CR26 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Vta1Q9CR26 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Vta1Q9CR26 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Vta1Q9CR26 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Vta1Q9CR26 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Vta1Q9CR26 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC23.32■■□□□ 1.32
Vta1Q9CR26 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Vta1Q9CR26 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Vta1Q9CR26 Gm10209-201ENSMUST00000203397 1607 ntBASIC23.32■■□□□ 1.32
Vta1Q9CR26 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Vta1Q9CR26 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Vta1Q9CR26 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23.31■■□□□ 1.32
Vta1Q9CR26 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Vta1Q9CR26 AC164629.5-201ENSMUST00000220387 632 ntBASIC23.3■■□□□ 1.32
Vta1Q9CR26 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC23.3■■□□□ 1.32
Vta1Q9CR26 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Vta1Q9CR26 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Vta1Q9CR26 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Vta1Q9CR26 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Vta1Q9CR26 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.29■■□□□ 1.32
Vta1Q9CR26 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Vta1Q9CR26 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Vta1Q9CR26 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Vta1Q9CR26 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Vta1Q9CR26 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Vta1Q9CR26 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Vta1Q9CR26 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Vta1Q9CR26 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC23.28■■□□□ 1.32
Vta1Q9CR26 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Vta1Q9CR26 Gm10493-201ENSMUST00000097270 612 ntBASIC23.28■■□□□ 1.32
Vta1Q9CR26 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Vta1Q9CR26 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Vta1Q9CR26 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Vta1Q9CR26 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC23.27■■□□□ 1.31
Vta1Q9CR26 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Vta1Q9CR26 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Vta1Q9CR26 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.26■■□□□ 1.31
Vta1Q9CR26 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Vta1Q9CR26 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC23.26■■□□□ 1.31
Vta1Q9CR26 Smad6-203ENSMUST00000179458 273 ntBASIC23.26■■□□□ 1.31
Vta1Q9CR26 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Vta1Q9CR26 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Vta1Q9CR26 Gm43403-201ENSMUST00000198011 1786 ntBASIC23.25■■□□□ 1.31
Vta1Q9CR26 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Vta1Q9CR26 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC23.25■■□□□ 1.31
Vta1Q9CR26 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Vta1Q9CR26 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.25■■□□□ 1.31
Vta1Q9CR26 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Vta1Q9CR26 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Vta1Q9CR26 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Vta1Q9CR26 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC23.24■■□□□ 1.31
Vta1Q9CR26 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Vta1Q9CR26 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Vta1Q9CR26 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC23.24■■□□□ 1.31
Vta1Q9CR26 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC23.24■■□□□ 1.31
Vta1Q9CR26 Gm40848-201ENSMUST00000221998 324 ntBASIC23.24■■□□□ 1.31
Vta1Q9CR26 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Vta1Q9CR26 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Vta1Q9CR26 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Vta1Q9CR26 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Vta1Q9CR26 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Vta1Q9CR26 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Vta1Q9CR26 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.23■■□□□ 1.31
Vta1Q9CR26 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Vta1Q9CR26 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Vta1Q9CR26 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Vta1Q9CR26 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Vta1Q9CR26 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
Vta1Q9CR26 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Vta1Q9CR26 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Vta1Q9CR26 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Vta1Q9CR26 Gm5913-201ENSMUST00000119397 1399 ntBASIC23.22■■□□□ 1.31
Vta1Q9CR26 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Vta1Q9CR26 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC23.22■■□□□ 1.31
Vta1Q9CR26 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC23.22■■□□□ 1.31
Vta1Q9CR26 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Vta1Q9CR26 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Vta1Q9CR26 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC23.21■■□□□ 1.31
Vta1Q9CR26 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Vta1Q9CR26 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Vta1Q9CR26 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Vta1Q9CR26 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Vta1Q9CR26 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Vta1Q9CR26 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Vta1Q9CR26 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Vta1Q9CR26 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC23.2■■□□□ 1.3
Vta1Q9CR26 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC23.2■■□□□ 1.3
Vta1Q9CR26 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Vta1Q9CR26 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.2■■□□□ 1.3
Vta1Q9CR26 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC23.2■■□□□ 1.3
Vta1Q9CR26 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
Vta1Q9CR26 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Vta1Q9CR26 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Vta1Q9CR26 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Vta1Q9CR26 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Vta1Q9CR26 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Vta1Q9CR26 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms