Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg3Q9CQV4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg3Q9CQV4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Retreg3Q9CQV4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg3Q9CQV4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg3Q9CQV4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retreg3Q9CQV4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retreg3Q9CQV4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retreg3Q9CQV4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retreg3Q9CQV4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retreg3Q9CQV4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retreg3Q9CQV4 Gm9847-201ENSMUST00000052528 599 ntBASIC20.56■□□□□ 0.88
Retreg3Q9CQV4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Retreg3Q9CQV4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg3Q9CQV4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Retreg3Q9CQV4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg3Q9CQV4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg3Q9CQV4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg3Q9CQV4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg3Q9CQV4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Retreg3Q9CQV4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Retreg3Q9CQV4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg3Q9CQV4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg3Q9CQV4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg3Q9CQV4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.54■□□□□ 0.88
Retreg3Q9CQV4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.54■□□□□ 0.88
Retreg3Q9CQV4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg3Q9CQV4 Gm7143-201ENSMUST00000222811 859 ntBASIC20.54■□□□□ 0.88
Retreg3Q9CQV4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg3Q9CQV4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Retreg3Q9CQV4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg3Q9CQV4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg3Q9CQV4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retreg3Q9CQV4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retreg3Q9CQV4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retreg3Q9CQV4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retreg3Q9CQV4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retreg3Q9CQV4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retreg3Q9CQV4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.53■□□□□ 0.88
Retreg3Q9CQV4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retreg3Q9CQV4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Retreg3Q9CQV4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retreg3Q9CQV4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retreg3Q9CQV4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Retreg3Q9CQV4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retreg3Q9CQV4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retreg3Q9CQV4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
Retreg3Q9CQV4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retreg3Q9CQV4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retreg3Q9CQV4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retreg3Q9CQV4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Retreg3Q9CQV4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.87
Retreg3Q9CQV4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retreg3Q9CQV4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retreg3Q9CQV4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retreg3Q9CQV4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.51■□□□□ 0.87
Retreg3Q9CQV4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retreg3Q9CQV4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retreg3Q9CQV4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.51■□□□□ 0.87
Retreg3Q9CQV4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retreg3Q9CQV4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retreg3Q9CQV4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retreg3Q9CQV4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retreg3Q9CQV4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retreg3Q9CQV4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retreg3Q9CQV4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retreg3Q9CQV4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.5■□□□□ 0.87
Retreg3Q9CQV4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retreg3Q9CQV4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retreg3Q9CQV4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retreg3Q9CQV4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg3Q9CQV4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.49■□□□□ 0.87
Retreg3Q9CQV4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg3Q9CQV4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg3Q9CQV4 Gm9870-201ENSMUST00000063874 645 ntBASIC20.49■□□□□ 0.87
Retreg3Q9CQV4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg3Q9CQV4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg3Q9CQV4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Retreg3Q9CQV4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Retreg3Q9CQV4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retreg3Q9CQV4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retreg3Q9CQV4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retreg3Q9CQV4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.48■□□□□ 0.87
Retreg3Q9CQV4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retreg3Q9CQV4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retreg3Q9CQV4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retreg3Q9CQV4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retreg3Q9CQV4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.48■□□□□ 0.87
Retreg3Q9CQV4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retreg3Q9CQV4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retreg3Q9CQV4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retreg3Q9CQV4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Retreg3Q9CQV4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retreg3Q9CQV4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.47■□□□□ 0.87
Retreg3Q9CQV4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retreg3Q9CQV4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retreg3Q9CQV4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retreg3Q9CQV4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retreg3Q9CQV4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Retreg3Q9CQV4 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms