Protein–RNA interactions for Protein: Q9CQJ4

Rnf2, E3 ubiquitin-protein ligase RING2, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf2Q9CQJ4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf2Q9CQJ4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.29■□□□□ 0.2
Rnf2Q9CQJ4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf2Q9CQJ4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf2Q9CQJ4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf2Q9CQJ4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf2Q9CQJ4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf2Q9CQJ4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf2Q9CQJ4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rnf2Q9CQJ4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf2Q9CQJ4 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.29■□□□□ 0.2
Rnf2Q9CQJ4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf2Q9CQJ4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf2Q9CQJ4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf2Q9CQJ4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf2Q9CQJ4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rnf2Q9CQJ4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.28■□□□□ 0.2
Rnf2Q9CQJ4 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.28■□□□□ 0.2
Rnf2Q9CQJ4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf2Q9CQJ4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rnf2Q9CQJ4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rnf2Q9CQJ4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf2Q9CQJ4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf2Q9CQJ4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf2Q9CQJ4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Rnf2Q9CQJ4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.27■□□□□ 0.2
Rnf2Q9CQJ4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.27■□□□□ 0.2
Rnf2Q9CQJ4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.27■□□□□ 0.2
Rnf2Q9CQJ4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf2Q9CQJ4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf2Q9CQJ4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf2Q9CQJ4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf2Q9CQJ4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf2Q9CQJ4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.26■□□□□ 0.19
Rnf2Q9CQJ4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf2Q9CQJ4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf2Q9CQJ4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.26■□□□□ 0.19
Rnf2Q9CQJ4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf2Q9CQJ4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf2Q9CQJ4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf2Q9CQJ4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf2Q9CQJ4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
Rnf2Q9CQJ4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Rnf2Q9CQJ4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Rnf2Q9CQJ4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.25■□□□□ 0.19
Rnf2Q9CQJ4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rnf2Q9CQJ4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf2Q9CQJ4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf2Q9CQJ4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf2Q9CQJ4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf2Q9CQJ4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf2Q9CQJ4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf2Q9CQJ4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf2Q9CQJ4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rnf2Q9CQJ4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf2Q9CQJ4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf2Q9CQJ4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf2Q9CQJ4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
Rnf2Q9CQJ4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf2Q9CQJ4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf2Q9CQJ4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf2Q9CQJ4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf2Q9CQJ4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf2Q9CQJ4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf2Q9CQJ4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rnf2Q9CQJ4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rnf2Q9CQJ4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.23■□□□□ 0.19
Rnf2Q9CQJ4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Rnf2Q9CQJ4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf2Q9CQJ4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf2Q9CQJ4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf2Q9CQJ4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf2Q9CQJ4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf2Q9CQJ4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf2Q9CQJ4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf2Q9CQJ4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf2Q9CQJ4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf2Q9CQJ4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf2Q9CQJ4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rnf2Q9CQJ4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf2Q9CQJ4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rnf2Q9CQJ4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf2Q9CQJ4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf2Q9CQJ4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf2Q9CQJ4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf2Q9CQJ4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf2Q9CQJ4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf2Q9CQJ4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf2Q9CQJ4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rnf2Q9CQJ4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf2Q9CQJ4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.21■□□□□ 0.19
Rnf2Q9CQJ4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf2Q9CQJ4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf2Q9CQJ4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf2Q9CQJ4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf2Q9CQJ4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Rnf2Q9CQJ4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf2Q9CQJ4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.21■□□□□ 0.19
Rnf2Q9CQJ4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf2Q9CQJ4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms