Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cotl1Q9CQI6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cotl1Q9CQI6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Cotl1Q9CQI6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Cotl1Q9CQI6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cotl1Q9CQI6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cotl1Q9CQI6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.83■□□□□ 0.12
Cotl1Q9CQI6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Cotl1Q9CQI6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cotl1Q9CQI6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cotl1Q9CQI6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Cotl1Q9CQI6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cotl1Q9CQI6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cotl1Q9CQI6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cotl1Q9CQI6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cotl1Q9CQI6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cotl1Q9CQI6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.82■□□□□ 0.12
Cotl1Q9CQI6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cotl1Q9CQI6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cotl1Q9CQI6 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cotl1Q9CQI6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cotl1Q9CQI6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cotl1Q9CQI6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cotl1Q9CQI6 Gm44428-201ENSMUST00000204474 874 ntBASIC15.82■□□□□ 0.12
Cotl1Q9CQI6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cotl1Q9CQI6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cotl1Q9CQI6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cotl1Q9CQI6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cotl1Q9CQI6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cotl1Q9CQI6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cotl1Q9CQI6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cotl1Q9CQI6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cotl1Q9CQI6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cotl1Q9CQI6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cotl1Q9CQI6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cotl1Q9CQI6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cotl1Q9CQI6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cotl1Q9CQI6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cotl1Q9CQI6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cotl1Q9CQI6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cotl1Q9CQI6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cotl1Q9CQI6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cotl1Q9CQI6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Cotl1Q9CQI6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cotl1Q9CQI6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cotl1Q9CQI6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cotl1Q9CQI6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cotl1Q9CQI6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cotl1Q9CQI6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cotl1Q9CQI6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cotl1Q9CQI6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cotl1Q9CQI6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
Cotl1Q9CQI6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cotl1Q9CQI6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cotl1Q9CQI6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cotl1Q9CQI6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Cotl1Q9CQI6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cotl1Q9CQI6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cotl1Q9CQI6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cotl1Q9CQI6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cotl1Q9CQI6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cotl1Q9CQI6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cotl1Q9CQI6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cotl1Q9CQI6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.79■□□□□ 0.12
Cotl1Q9CQI6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cotl1Q9CQI6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cotl1Q9CQI6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cotl1Q9CQI6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cotl1Q9CQI6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.79■□□□□ 0.12
Cotl1Q9CQI6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cotl1Q9CQI6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.79■□□□□ 0.12
Cotl1Q9CQI6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cotl1Q9CQI6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cotl1Q9CQI6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cotl1Q9CQI6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cotl1Q9CQI6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cotl1Q9CQI6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cotl1Q9CQI6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cotl1Q9CQI6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cotl1Q9CQI6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.78■□□□□ 0.12
Cotl1Q9CQI6 Gm9806-201ENSMUST00000051080 552 ntBASIC15.78■□□□□ 0.12
Cotl1Q9CQI6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cotl1Q9CQI6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cotl1Q9CQI6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cotl1Q9CQI6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cotl1Q9CQI6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cotl1Q9CQI6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cotl1Q9CQI6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Cotl1Q9CQI6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.77■□□□□ 0.12
Cotl1Q9CQI6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cotl1Q9CQI6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.77■□□□□ 0.12
Cotl1Q9CQI6 Scarna2-201ENSMUST00000157560 414 ntBASIC15.77■□□□□ 0.12
Cotl1Q9CQI6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Cotl1Q9CQI6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cotl1Q9CQI6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cotl1Q9CQI6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cotl1Q9CQI6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cotl1Q9CQI6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cotl1Q9CQI6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cotl1Q9CQI6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms