Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.32■■□□□ 1
Col25a1Q99MQ5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Col25a1Q99MQ5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col25a1Q99MQ5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Col25a1Q99MQ5 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Col25a1Q99MQ5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Col25a1Q99MQ5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Col25a1Q99MQ5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Col25a1Q99MQ5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col25a1Q99MQ5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col25a1Q99MQ5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.3■■□□□ 1
Col25a1Q99MQ5 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.3■■□□□ 1
Col25a1Q99MQ5 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Col25a1Q99MQ5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
Col25a1Q99MQ5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.29■■□□□ 1
Col25a1Q99MQ5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.29■■□□□ 1
Col25a1Q99MQ5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.29■■□□□ 1
Col25a1Q99MQ5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.29■■□□□ 1
Col25a1Q99MQ5 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.29■■□□□ 1
Col25a1Q99MQ5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.29■■□□□ 1
Col25a1Q99MQ5 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col25a1Q99MQ5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.29■■□□□ 1
Col25a1Q99MQ5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Col25a1Q99MQ5 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col25a1Q99MQ5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col25a1Q99MQ5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col25a1Q99MQ5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Col25a1Q99MQ5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.29■■□□□ 1
Col25a1Q99MQ5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.28■■□□□ 1
Col25a1Q99MQ5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.28■■□□□ 1
Col25a1Q99MQ5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
Col25a1Q99MQ5 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col25a1Q99MQ5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.28■■□□□ 1
Col25a1Q99MQ5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.28■■□□□ 1
Col25a1Q99MQ5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col25a1Q99MQ5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.28■■□□□ 1
Col25a1Q99MQ5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col25a1Q99MQ5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col25a1Q99MQ5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Col25a1Q99MQ5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Col25a1Q99MQ5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col25a1Q99MQ5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.27■■□□□ 1
Col25a1Q99MQ5 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col25a1Q99MQ5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col25a1Q99MQ5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col25a1Q99MQ5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col25a1Q99MQ5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.26■□□□□ 0.99
Col25a1Q99MQ5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col25a1Q99MQ5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col25a1Q99MQ5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col25a1Q99MQ5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.25■□□□□ 0.99
Col25a1Q99MQ5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col25a1Q99MQ5 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col25a1Q99MQ5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col25a1Q99MQ5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col25a1Q99MQ5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col25a1Q99MQ5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col25a1Q99MQ5 Gm12527-201ENSMUST00000117967 564 ntBASIC21.24■□□□□ 0.99
Col25a1Q99MQ5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.24■□□□□ 0.99
Col25a1Q99MQ5 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.24■□□□□ 0.99
Col25a1Q99MQ5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col25a1Q99MQ5 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col25a1Q99MQ5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col25a1Q99MQ5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col25a1Q99MQ5 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col25a1Q99MQ5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col25a1Q99MQ5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.23■□□□□ 0.99
Col25a1Q99MQ5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Col25a1Q99MQ5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col25a1Q99MQ5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col25a1Q99MQ5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col25a1Q99MQ5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col25a1Q99MQ5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col25a1Q99MQ5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col25a1Q99MQ5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.22■□□□□ 0.99
Col25a1Q99MQ5 Gm4968-201ENSMUST00000071458 858 ntBASIC21.22■□□□□ 0.99
Col25a1Q99MQ5 Gm10812-201ENSMUST00000099864 546 ntBASIC21.22■□□□□ 0.99
Col25a1Q99MQ5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col25a1Q99MQ5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.22■□□□□ 0.99
Col25a1Q99MQ5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col25a1Q99MQ5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col25a1Q99MQ5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col25a1Q99MQ5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Col25a1Q99MQ5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.21■□□□□ 0.99
Col25a1Q99MQ5 Gm13168-201ENSMUST00000121771 632 ntBASIC21.21■□□□□ 0.99
Col25a1Q99MQ5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.21■□□□□ 0.99
Col25a1Q99MQ5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col25a1Q99MQ5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col25a1Q99MQ5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col25a1Q99MQ5 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Col25a1Q99MQ5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col25a1Q99MQ5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Col25a1Q99MQ5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Col25a1Q99MQ5 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.2■□□□□ 0.98
Col25a1Q99MQ5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.2■□□□□ 0.98
Col25a1Q99MQ5 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Col25a1Q99MQ5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col25a1Q99MQ5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col25a1Q99MQ5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col25a1Q99MQ5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms