Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Rfc4Q99J62 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rfc4Q99J62 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rfc4Q99J62 Gm10493-201ENSMUST00000097270 612 ntBASIC23.7■■□□□ 1.38
Rfc4Q99J62 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.7■■□□□ 1.38
Rfc4Q99J62 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rfc4Q99J62 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rfc4Q99J62 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rfc4Q99J62 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rfc4Q99J62 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rfc4Q99J62 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rfc4Q99J62 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rfc4Q99J62 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.69■■□□□ 1.38
Rfc4Q99J62 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rfc4Q99J62 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rfc4Q99J62 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.69■■□□□ 1.38
Rfc4Q99J62 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rfc4Q99J62 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rfc4Q99J62 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rfc4Q99J62 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rfc4Q99J62 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Rfc4Q99J62 Spcs1-207ENSMUST00000228767 1008 ntBASIC23.68■■□□□ 1.38
Rfc4Q99J62 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
Rfc4Q99J62 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rfc4Q99J62 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rfc4Q99J62 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC23.67■■□□□ 1.38
Rfc4Q99J62 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rfc4Q99J62 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rfc4Q99J62 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rfc4Q99J62 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Rfc4Q99J62 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Rfc4Q99J62 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Rfc4Q99J62 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.66■■□□□ 1.38
Rfc4Q99J62 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rfc4Q99J62 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.66■■□□□ 1.38
Rfc4Q99J62 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Rfc4Q99J62 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rfc4Q99J62 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rfc4Q99J62 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rfc4Q99J62 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rfc4Q99J62 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rfc4Q99J62 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.65■■□□□ 1.38
Rfc4Q99J62 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rfc4Q99J62 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rfc4Q99J62 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rfc4Q99J62 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rfc4Q99J62 Gm42569-201ENSMUST00000200539 472 ntBASIC23.64■■□□□ 1.37
Rfc4Q99J62 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.64■■□□□ 1.37
Rfc4Q99J62 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.64■■□□□ 1.37
Rfc4Q99J62 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rfc4Q99J62 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rfc4Q99J62 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Rfc4Q99J62 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC23.63■■□□□ 1.37
Rfc4Q99J62 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Rfc4Q99J62 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC23.63■■□□□ 1.37
Rfc4Q99J62 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Rfc4Q99J62 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rfc4Q99J62 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rfc4Q99J62 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rfc4Q99J62 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rfc4Q99J62 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rfc4Q99J62 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC23.62■■□□□ 1.37
Rfc4Q99J62 Gm26571-201ENSMUST00000181399 666 ntBASIC23.62■■□□□ 1.37
Rfc4Q99J62 Gm27405-201ENSMUST00000184201 112 ntBASIC23.62■■□□□ 1.37
Rfc4Q99J62 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rfc4Q99J62 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC23.62■■□□□ 1.37
Rfc4Q99J62 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.62■■□□□ 1.37
Rfc4Q99J62 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rfc4Q99J62 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Rfc4Q99J62 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC23.61■■□□□ 1.37
Rfc4Q99J62 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC23.61■■□□□ 1.37
Rfc4Q99J62 Gm42642-201ENSMUST00000200683 355 ntBASIC23.61■■□□□ 1.37
Rfc4Q99J62 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rfc4Q99J62 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC23.61■■□□□ 1.37
Rfc4Q99J62 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rfc4Q99J62 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rfc4Q99J62 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Rfc4Q99J62 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Rfc4Q99J62 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC23.6■■□□□ 1.37
Rfc4Q99J62 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC23.6■■□□□ 1.37
Rfc4Q99J62 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
Rfc4Q99J62 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rfc4Q99J62 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rfc4Q99J62 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.59■■□□□ 1.37
Rfc4Q99J62 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.59■■□□□ 1.37
Rfc4Q99J62 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.59■■□□□ 1.37
Rfc4Q99J62 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rfc4Q99J62 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rfc4Q99J62 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rfc4Q99J62 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rfc4Q99J62 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rfc4Q99J62 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC23.59■■□□□ 1.37
Rfc4Q99J62 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rfc4Q99J62 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rfc4Q99J62 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rfc4Q99J62 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rfc4Q99J62 Gm40848-201ENSMUST00000221998 324 ntBASIC23.58■■□□□ 1.37
Rfc4Q99J62 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rfc4Q99J62 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rfc4Q99J62 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms