Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha11Q91Y19 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha11Q91Y19 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha11Q91Y19 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdha11Q91Y19 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdha11Q91Y19 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Pcdha11Q91Y19 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha11Q91Y19 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Pcdha11Q91Y19 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha11Q91Y19 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha11Q91Y19 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha11Q91Y19 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.51■■□□□ 1.03
Pcdha11Q91Y19 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha11Q91Y19 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.51■■□□□ 1.03
Pcdha11Q91Y19 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha11Q91Y19 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha11Q91Y19 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Pcdha11Q91Y19 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha11Q91Y19 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.5■■□□□ 1.03
Pcdha11Q91Y19 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Pcdha11Q91Y19 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdha11Q91Y19 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha11Q91Y19 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha11Q91Y19 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Pcdha11Q91Y19 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha11Q91Y19 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha11Q91Y19 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.49■■□□□ 1.03
Pcdha11Q91Y19 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha11Q91Y19 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha11Q91Y19 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Pcdha11Q91Y19 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha11Q91Y19 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.48■■□□□ 1.03
Pcdha11Q91Y19 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.48■■□□□ 1.03
Pcdha11Q91Y19 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha11Q91Y19 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha11Q91Y19 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha11Q91Y19 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha11Q91Y19 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha11Q91Y19 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.47■■□□□ 1.03
Pcdha11Q91Y19 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha11Q91Y19 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha11Q91Y19 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.47■■□□□ 1.03
Pcdha11Q91Y19 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Pcdha11Q91Y19 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha11Q91Y19 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha11Q91Y19 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha11Q91Y19 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.47■■□□□ 1.03
Pcdha11Q91Y19 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha11Q91Y19 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha11Q91Y19 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha11Q91Y19 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha11Q91Y19 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha11Q91Y19 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Pcdha11Q91Y19 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha11Q91Y19 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha11Q91Y19 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha11Q91Y19 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha11Q91Y19 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha11Q91Y19 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha11Q91Y19 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha11Q91Y19 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.45■■□□□ 1.02
Pcdha11Q91Y19 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.45■■□□□ 1.02
Pcdha11Q91Y19 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha11Q91Y19 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha11Q91Y19 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha11Q91Y19 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Pcdha11Q91Y19 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha11Q91Y19 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.44■■□□□ 1.02
Pcdha11Q91Y19 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.44■■□□□ 1.02
Pcdha11Q91Y19 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha11Q91Y19 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Pcdha11Q91Y19 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha11Q91Y19 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha11Q91Y19 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha11Q91Y19 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.43■■□□□ 1.02
Pcdha11Q91Y19 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha11Q91Y19 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha11Q91Y19 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.43■■□□□ 1.02
Pcdha11Q91Y19 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha11Q91Y19 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha11Q91Y19 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha11Q91Y19 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha11Q91Y19 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdha11Q91Y19 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdha11Q91Y19 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdha11Q91Y19 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdha11Q91Y19 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdha11Q91Y19 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdha11Q91Y19 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdha11Q91Y19 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdha11Q91Y19 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha11Q91Y19 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha11Q91Y19 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha11Q91Y19 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Pcdha11Q91Y19 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha11Q91Y19 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha11Q91Y19 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha11Q91Y19 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha11Q91Y19 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha11Q91Y19 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms