Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.4■■□□□ 1.02
Pcdhb18Q91Y02 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.4■■□□□ 1.02
Pcdhb18Q91Y02 Gm18284-201ENSMUST00000172604 624 ntBASIC21.4■■□□□ 1.02
Pcdhb18Q91Y02 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb18Q91Y02 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb18Q91Y02 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.39■■□□□ 1.02
Pcdhb18Q91Y02 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb18Q91Y02 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb18Q91Y02 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb18Q91Y02 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.39■■□□□ 1.01
Pcdhb18Q91Y02 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb18Q91Y02 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.39■■□□□ 1.01
Pcdhb18Q91Y02 Gm43017-201ENSMUST00000198296 752 ntBASIC21.39■■□□□ 1.01
Pcdhb18Q91Y02 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.39■■□□□ 1.01
Pcdhb18Q91Y02 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.39■■□□□ 1.01
Pcdhb18Q91Y02 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.01
Pcdhb18Q91Y02 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Pcdhb18Q91Y02 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Pcdhb18Q91Y02 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb18Q91Y02 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb18Q91Y02 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.38■■□□□ 1.01
Pcdhb18Q91Y02 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb18Q91Y02 Gm8493-201ENSMUST00000196881 489 ntBASIC21.38■■□□□ 1.01
Pcdhb18Q91Y02 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.38■■□□□ 1.01
Pcdhb18Q91Y02 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Pcdhb18Q91Y02 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb18Q91Y02 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb18Q91Y02 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb18Q91Y02 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb18Q91Y02 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Pcdhb18Q91Y02 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.37■■□□□ 1.01
Pcdhb18Q91Y02 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb18Q91Y02 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.37■■□□□ 1.01
Pcdhb18Q91Y02 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb18Q91Y02 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb18Q91Y02 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb18Q91Y02 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pcdhb18Q91Y02 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb18Q91Y02 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
Pcdhb18Q91Y02 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb18Q91Y02 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Pcdhb18Q91Y02 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Pcdhb18Q91Y02 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb18Q91Y02 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb18Q91Y02 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb18Q91Y02 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb18Q91Y02 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb18Q91Y02 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb18Q91Y02 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb18Q91Y02 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb18Q91Y02 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb18Q91Y02 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb18Q91Y02 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb18Q91Y02 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb18Q91Y02 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb18Q91Y02 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb18Q91Y02 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb18Q91Y02 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
Pcdhb18Q91Y02 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.33■■□□□ 1.01
Pcdhb18Q91Y02 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Pcdhb18Q91Y02 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.33■■□□□ 1
Pcdhb18Q91Y02 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.33■■□□□ 1
Pcdhb18Q91Y02 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb18Q91Y02 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb18Q91Y02 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Pcdhb18Q91Y02 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb18Q91Y02 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb18Q91Y02 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.32■■□□□ 1
Pcdhb18Q91Y02 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb18Q91Y02 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb18Q91Y02 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb18Q91Y02 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pcdhb18Q91Y02 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb18Q91Y02 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb18Q91Y02 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Pcdhb18Q91Y02 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb18Q91Y02 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb18Q91Y02 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb18Q91Y02 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb18Q91Y02 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb18Q91Y02 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb18Q91Y02 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb18Q91Y02 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb18Q91Y02 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.3■■□□□ 1
Pcdhb18Q91Y02 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb18Q91Y02 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb18Q91Y02 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
Pcdhb18Q91Y02 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.29■■□□□ 1
Pcdhb18Q91Y02 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.29■■□□□ 1
Pcdhb18Q91Y02 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb18Q91Y02 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pcdhb18Q91Y02 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb18Q91Y02 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.29■■□□□ 1
Pcdhb18Q91Y02 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.29■■□□□ 1
Pcdhb18Q91Y02 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Pcdhb18Q91Y02 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.28■■□□□ 1
Pcdhb18Q91Y02 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Pcdhb18Q91Y02 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb18Q91Y02 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb18Q91Y02 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms