Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb4Q91XZ6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb4Q91XZ6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhb4Q91XZ6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb4Q91XZ6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb4Q91XZ6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb4Q91XZ6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb4Q91XZ6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb4Q91XZ6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb4Q91XZ6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb4Q91XZ6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb4Q91XZ6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb4Q91XZ6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb4Q91XZ6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.22■□□□□ 0.83
Pcdhb4Q91XZ6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb4Q91XZ6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.22■□□□□ 0.83
Pcdhb4Q91XZ6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.22■□□□□ 0.83
Pcdhb4Q91XZ6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb4Q91XZ6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb4Q91XZ6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pcdhb4Q91XZ6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhb4Q91XZ6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb4Q91XZ6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb4Q91XZ6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb4Q91XZ6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Pcdhb4Q91XZ6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb4Q91XZ6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb4Q91XZ6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb4Q91XZ6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb4Q91XZ6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb4Q91XZ6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb4Q91XZ6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb4Q91XZ6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb4Q91XZ6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb4Q91XZ6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb4Q91XZ6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb4Q91XZ6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb4Q91XZ6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb4Q91XZ6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb4Q91XZ6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb4Q91XZ6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb4Q91XZ6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb4Q91XZ6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb4Q91XZ6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
Pcdhb4Q91XZ6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdhb4Q91XZ6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb4Q91XZ6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.19■□□□□ 0.82
Pcdhb4Q91XZ6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb4Q91XZ6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb4Q91XZ6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhb4Q91XZ6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb4Q91XZ6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb4Q91XZ6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb4Q91XZ6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhb4Q91XZ6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb4Q91XZ6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb4Q91XZ6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb4Q91XZ6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb4Q91XZ6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhb4Q91XZ6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb4Q91XZ6 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.17■□□□□ 0.82
Pcdhb4Q91XZ6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb4Q91XZ6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb4Q91XZ6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb4Q91XZ6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb4Q91XZ6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb4Q91XZ6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb4Q91XZ6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb4Q91XZ6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhb4Q91XZ6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb4Q91XZ6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb4Q91XZ6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdhb4Q91XZ6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb4Q91XZ6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb4Q91XZ6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb4Q91XZ6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhb4Q91XZ6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb4Q91XZ6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb4Q91XZ6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb4Q91XZ6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb4Q91XZ6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb4Q91XZ6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb4Q91XZ6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdhb4Q91XZ6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.14■□□□□ 0.81
Pcdhb4Q91XZ6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb4Q91XZ6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb4Q91XZ6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb4Q91XZ6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb4Q91XZ6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcdhb4Q91XZ6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb4Q91XZ6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Pcdhb4Q91XZ6 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.13■□□□□ 0.81
Pcdhb4Q91XZ6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcdhb4Q91XZ6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb4Q91XZ6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhb4Q91XZ6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb4Q91XZ6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb4Q91XZ6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb4Q91XZ6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Pcdhb4Q91XZ6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms