Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HnrnpuQ8VEK3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HnrnpuQ8VEK3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC25.47■■□□□ 1.67
HnrnpuQ8VEK3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC25.47■■□□□ 1.67
HnrnpuQ8VEK3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
HnrnpuQ8VEK3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC25.46■■□□□ 1.67
HnrnpuQ8VEK3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HnrnpuQ8VEK3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
HnrnpuQ8VEK3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HnrnpuQ8VEK3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HnrnpuQ8VEK3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HnrnpuQ8VEK3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
HnrnpuQ8VEK3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HnrnpuQ8VEK3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HnrnpuQ8VEK3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC25.46■■□□□ 1.67
HnrnpuQ8VEK3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
HnrnpuQ8VEK3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HnrnpuQ8VEK3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
HnrnpuQ8VEK3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
HnrnpuQ8VEK3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HnrnpuQ8VEK3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
HnrnpuQ8VEK3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
HnrnpuQ8VEK3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
HnrnpuQ8VEK3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC25.45■■□□□ 1.66
HnrnpuQ8VEK3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
HnrnpuQ8VEK3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC25.44■■□□□ 1.66
HnrnpuQ8VEK3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HnrnpuQ8VEK3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HnrnpuQ8VEK3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HnrnpuQ8VEK3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HnrnpuQ8VEK3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC25.44■■□□□ 1.66
HnrnpuQ8VEK3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC25.43■■□□□ 1.66
HnrnpuQ8VEK3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
HnrnpuQ8VEK3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
HnrnpuQ8VEK3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
HnrnpuQ8VEK3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
HnrnpuQ8VEK3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
HnrnpuQ8VEK3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
HnrnpuQ8VEK3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
HnrnpuQ8VEK3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
HnrnpuQ8VEK3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
HnrnpuQ8VEK3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
HnrnpuQ8VEK3 Gm7417-201ENSMUST00000192950 473 ntBASIC25.42■■□□□ 1.66
HnrnpuQ8VEK3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
HnrnpuQ8VEK3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
HnrnpuQ8VEK3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
HnrnpuQ8VEK3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
HnrnpuQ8VEK3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
HnrnpuQ8VEK3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
HnrnpuQ8VEK3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
HnrnpuQ8VEK3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
HnrnpuQ8VEK3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
HnrnpuQ8VEK3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
HnrnpuQ8VEK3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
HnrnpuQ8VEK3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
HnrnpuQ8VEK3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
HnrnpuQ8VEK3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
HnrnpuQ8VEK3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
HnrnpuQ8VEK3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
HnrnpuQ8VEK3 Gm7143-201ENSMUST00000222811 859 ntBASIC25.4■■□□□ 1.66
HnrnpuQ8VEK3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HnrnpuQ8VEK3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HnrnpuQ8VEK3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HnrnpuQ8VEK3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HnrnpuQ8VEK3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HnrnpuQ8VEK3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
HnrnpuQ8VEK3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
HnrnpuQ8VEK3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
HnrnpuQ8VEK3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
HnrnpuQ8VEK3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
HnrnpuQ8VEK3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC25.39■■□□□ 1.66
HnrnpuQ8VEK3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
HnrnpuQ8VEK3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
HnrnpuQ8VEK3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
HnrnpuQ8VEK3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
HnrnpuQ8VEK3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
HnrnpuQ8VEK3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
HnrnpuQ8VEK3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC25.38■■□□□ 1.65
HnrnpuQ8VEK3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
HnrnpuQ8VEK3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
HnrnpuQ8VEK3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
HnrnpuQ8VEK3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
HnrnpuQ8VEK3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC25.37■■□□□ 1.65
HnrnpuQ8VEK3 Etf1-202ENSMUST00000180351 108 ntBASIC25.37■■□□□ 1.65
HnrnpuQ8VEK3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
HnrnpuQ8VEK3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
HnrnpuQ8VEK3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
HnrnpuQ8VEK3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
HnrnpuQ8VEK3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
HnrnpuQ8VEK3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HnrnpuQ8VEK3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HnrnpuQ8VEK3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HnrnpuQ8VEK3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
HnrnpuQ8VEK3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC25.35■■□□□ 1.65
HnrnpuQ8VEK3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HnrnpuQ8VEK3 Snhg20-203ENSMUST00000182811 2153 ntBASIC25.35■■□□□ 1.65
HnrnpuQ8VEK3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
HnrnpuQ8VEK3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HnrnpuQ8VEK3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC25.35■■□□□ 1.65
HnrnpuQ8VEK3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms