Protein–RNA interactions for Protein: Q8VCI7

Swsap1, ATPase SWSAP1, mousemouse

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swsap1Q8VCI7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Swsap1Q8VCI7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Swsap1Q8VCI7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Swsap1Q8VCI7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Swsap1Q8VCI7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Swsap1Q8VCI7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Swsap1Q8VCI7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Swsap1Q8VCI7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Swsap1Q8VCI7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.33■□□□□ 0.52
Swsap1Q8VCI7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Swsap1Q8VCI7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Swsap1Q8VCI7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Swsap1Q8VCI7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Swsap1Q8VCI7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Swsap1Q8VCI7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Swsap1Q8VCI7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Swsap1Q8VCI7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Swsap1Q8VCI7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Swsap1Q8VCI7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Swsap1Q8VCI7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Swsap1Q8VCI7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Swsap1Q8VCI7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.32■□□□□ 0.52
Swsap1Q8VCI7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Swsap1Q8VCI7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Swsap1Q8VCI7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Swsap1Q8VCI7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Swsap1Q8VCI7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Swsap1Q8VCI7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Swsap1Q8VCI7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Swsap1Q8VCI7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Swsap1Q8VCI7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Swsap1Q8VCI7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Swsap1Q8VCI7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Swsap1Q8VCI7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Swsap1Q8VCI7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Swsap1Q8VCI7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Swsap1Q8VCI7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Swsap1Q8VCI7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Swsap1Q8VCI7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Swsap1Q8VCI7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Swsap1Q8VCI7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Swsap1Q8VCI7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Swsap1Q8VCI7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Swsap1Q8VCI7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Swsap1Q8VCI7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Swsap1Q8VCI7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Swsap1Q8VCI7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Swsap1Q8VCI7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Swsap1Q8VCI7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Swsap1Q8VCI7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.29■□□□□ 0.52
Swsap1Q8VCI7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Swsap1Q8VCI7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Swsap1Q8VCI7 Gm9847-201ENSMUST00000052528 599 ntBASIC18.29■□□□□ 0.52
Swsap1Q8VCI7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Swsap1Q8VCI7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Swsap1Q8VCI7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Swsap1Q8VCI7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Swsap1Q8VCI7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Swsap1Q8VCI7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Swsap1Q8VCI7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.28■□□□□ 0.52
Swsap1Q8VCI7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Swsap1Q8VCI7 Gm13241-201ENSMUST00000094493 780 ntBASIC18.28■□□□□ 0.52
Swsap1Q8VCI7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Swsap1Q8VCI7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Swsap1Q8VCI7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Swsap1Q8VCI7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Swsap1Q8VCI7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Swsap1Q8VCI7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Swsap1Q8VCI7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Swsap1Q8VCI7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Swsap1Q8VCI7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Swsap1Q8VCI7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
Swsap1Q8VCI7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Swsap1Q8VCI7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Swsap1Q8VCI7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Swsap1Q8VCI7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Swsap1Q8VCI7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Swsap1Q8VCI7 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.27■□□□□ 0.52
Swsap1Q8VCI7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Swsap1Q8VCI7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Swsap1Q8VCI7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Swsap1Q8VCI7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Swsap1Q8VCI7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Swsap1Q8VCI7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Swsap1Q8VCI7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Swsap1Q8VCI7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Swsap1Q8VCI7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Swsap1Q8VCI7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Swsap1Q8VCI7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Swsap1Q8VCI7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Swsap1Q8VCI7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.26■□□□□ 0.51
Swsap1Q8VCI7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Swsap1Q8VCI7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Swsap1Q8VCI7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Swsap1Q8VCI7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Swsap1Q8VCI7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Swsap1Q8VCI7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Swsap1Q8VCI7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Swsap1Q8VCI7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Swsap1Q8VCI7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms