Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc59Q8R2N0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc59Q8R2N0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc59Q8R2N0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.21■□□□□ 0.67
Ccdc59Q8R2N0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc59Q8R2N0 Gm5812-201ENSMUST00000061073 957 ntBASIC19.21■□□□□ 0.67
Ccdc59Q8R2N0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc59Q8R2N0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc59Q8R2N0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.2■□□□□ 0.66
Ccdc59Q8R2N0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc59Q8R2N0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ccdc59Q8R2N0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ccdc59Q8R2N0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.2■□□□□ 0.66
Ccdc59Q8R2N0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc59Q8R2N0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc59Q8R2N0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc59Q8R2N0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc59Q8R2N0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ccdc59Q8R2N0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc59Q8R2N0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc59Q8R2N0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ccdc59Q8R2N0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc59Q8R2N0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc59Q8R2N0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc59Q8R2N0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc59Q8R2N0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc59Q8R2N0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.18■□□□□ 0.66
Ccdc59Q8R2N0 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.18■□□□□ 0.66
Ccdc59Q8R2N0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccdc59Q8R2N0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc59Q8R2N0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc59Q8R2N0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc59Q8R2N0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc59Q8R2N0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc59Q8R2N0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc59Q8R2N0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ccdc59Q8R2N0 Gm45444-201ENSMUST00000211394 898 ntBASIC19.17■□□□□ 0.66
Ccdc59Q8R2N0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ccdc59Q8R2N0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc59Q8R2N0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc59Q8R2N0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc59Q8R2N0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc59Q8R2N0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc59Q8R2N0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.16■□□□□ 0.66
Ccdc59Q8R2N0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc59Q8R2N0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc59Q8R2N0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
Ccdc59Q8R2N0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Ccdc59Q8R2N0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc59Q8R2N0 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.15■□□□□ 0.66
Ccdc59Q8R2N0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc59Q8R2N0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc59Q8R2N0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc59Q8R2N0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc59Q8R2N0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ccdc59Q8R2N0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.15■□□□□ 0.66
Ccdc59Q8R2N0 Gm43566-201ENSMUST00000196851 808 ntBASIC19.15■□□□□ 0.66
Ccdc59Q8R2N0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc59Q8R2N0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc59Q8R2N0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc59Q8R2N0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc59Q8R2N0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc59Q8R2N0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc59Q8R2N0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc59Q8R2N0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc59Q8R2N0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Ccdc59Q8R2N0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc59Q8R2N0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc59Q8R2N0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc59Q8R2N0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccdc59Q8R2N0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc59Q8R2N0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc59Q8R2N0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc59Q8R2N0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc59Q8R2N0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc59Q8R2N0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc59Q8R2N0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc59Q8R2N0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc59Q8R2N0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc59Q8R2N0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc59Q8R2N0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ccdc59Q8R2N0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc59Q8R2N0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc59Q8R2N0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc59Q8R2N0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc59Q8R2N0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc59Q8R2N0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc59Q8R2N0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ccdc59Q8R2N0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Ccdc59Q8R2N0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc59Q8R2N0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc59Q8R2N0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc59Q8R2N0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc59Q8R2N0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.11■□□□□ 0.65
Ccdc59Q8R2N0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Ccdc59Q8R2N0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc59Q8R2N0 Gm15546-201ENSMUST00000122095 826 ntBASIC19.11■□□□□ 0.65
Ccdc59Q8R2N0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccdc59Q8R2N0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.11■□□□□ 0.65
Ccdc59Q8R2N0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms