Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Chmp7Q8R1T1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Chmp7Q8R1T1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Chmp7Q8R1T1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Chmp7Q8R1T1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC26.34■■□□□ 1.81
Chmp7Q8R1T1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Chmp7Q8R1T1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Chmp7Q8R1T1 Gm26833-201ENSMUST00000180899 440 ntBASIC26.34■■□□□ 1.81
Chmp7Q8R1T1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Chmp7Q8R1T1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Chmp7Q8R1T1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Chmp7Q8R1T1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
Chmp7Q8R1T1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Chmp7Q8R1T1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Chmp7Q8R1T1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Chmp7Q8R1T1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC26.33■■□□□ 1.81
Chmp7Q8R1T1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC26.33■■□□□ 1.81
Chmp7Q8R1T1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Chmp7Q8R1T1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Chmp7Q8R1T1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
Chmp7Q8R1T1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Chmp7Q8R1T1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Chmp7Q8R1T1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC26.32■■□□□ 1.8
Chmp7Q8R1T1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Chmp7Q8R1T1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Chmp7Q8R1T1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Chmp7Q8R1T1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Chmp7Q8R1T1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Chmp7Q8R1T1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Chmp7Q8R1T1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Chmp7Q8R1T1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
Chmp7Q8R1T1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Chmp7Q8R1T1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC26.31■■□□□ 1.8
Chmp7Q8R1T1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Chmp7Q8R1T1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Chmp7Q8R1T1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Chmp7Q8R1T1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
Chmp7Q8R1T1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Chmp7Q8R1T1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Chmp7Q8R1T1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC26.3■■□□□ 1.8
Chmp7Q8R1T1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Chmp7Q8R1T1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Chmp7Q8R1T1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Chmp7Q8R1T1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Chmp7Q8R1T1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Chmp7Q8R1T1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Chmp7Q8R1T1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Chmp7Q8R1T1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC26.29■■□□□ 1.8
Chmp7Q8R1T1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Chmp7Q8R1T1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Chmp7Q8R1T1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Chmp7Q8R1T1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC26.28■■□□□ 1.8
Chmp7Q8R1T1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Chmp7Q8R1T1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Chmp7Q8R1T1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
Chmp7Q8R1T1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC26.27■■□□□ 1.8
Chmp7Q8R1T1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Chmp7Q8R1T1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Chmp7Q8R1T1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Chmp7Q8R1T1 Gm10209-201ENSMUST00000203397 1607 ntBASIC26.26■■□□□ 1.79
Chmp7Q8R1T1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC26.26■■□□□ 1.79
Chmp7Q8R1T1 Gm43060-201ENSMUST00000200621 289 ntBASIC26.26■■□□□ 1.79
Chmp7Q8R1T1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Chmp7Q8R1T1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Chmp7Q8R1T1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Chmp7Q8R1T1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Chmp7Q8R1T1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC26.25■■□□□ 1.79
Chmp7Q8R1T1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Chmp7Q8R1T1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Chmp7Q8R1T1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Chmp7Q8R1T1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Chmp7Q8R1T1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Chmp7Q8R1T1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Chmp7Q8R1T1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Chmp7Q8R1T1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC26.23■■□□□ 1.79
Chmp7Q8R1T1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Chmp7Q8R1T1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Chmp7Q8R1T1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Chmp7Q8R1T1 Gm43403-201ENSMUST00000198011 1786 ntBASIC26.23■■□□□ 1.79
Chmp7Q8R1T1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Chmp7Q8R1T1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Chmp7Q8R1T1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Chmp7Q8R1T1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Chmp7Q8R1T1 AC164629.5-201ENSMUST00000220387 632 ntBASIC26.21■■□□□ 1.79
Chmp7Q8R1T1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC26.21■■□□□ 1.79
Chmp7Q8R1T1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Chmp7Q8R1T1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC26.21■■□□□ 1.79
Chmp7Q8R1T1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Chmp7Q8R1T1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Chmp7Q8R1T1 Gm40848-201ENSMUST00000221998 324 ntBASIC26.2■■□□□ 1.78
Chmp7Q8R1T1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Chmp7Q8R1T1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Chmp7Q8R1T1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Chmp7Q8R1T1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Chmp7Q8R1T1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Chmp7Q8R1T1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Chmp7Q8R1T1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Chmp7Q8R1T1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Chmp7Q8R1T1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Chmp7Q8R1T1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms