Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Atf7Q8R0S1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Atf7Q8R0S1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Atf7Q8R0S1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Atf7Q8R0S1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Atf7Q8R0S1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Atf7Q8R0S1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Atf7Q8R0S1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Atf7Q8R0S1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC24.18■■□□□ 1.46
Atf7Q8R0S1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Atf7Q8R0S1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Atf7Q8R0S1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Atf7Q8R0S1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Atf7Q8R0S1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Atf7Q8R0S1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Atf7Q8R0S1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Atf7Q8R0S1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Atf7Q8R0S1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Atf7Q8R0S1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC24.17■■□□□ 1.46
Atf7Q8R0S1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Atf7Q8R0S1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Atf7Q8R0S1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Atf7Q8R0S1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Atf7Q8R0S1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Atf7Q8R0S1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Atf7Q8R0S1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Atf7Q8R0S1 Gm7143-201ENSMUST00000222811 859 ntBASIC24.16■■□□□ 1.46
Atf7Q8R0S1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Atf7Q8R0S1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
Atf7Q8R0S1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Atf7Q8R0S1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
Atf7Q8R0S1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Atf7Q8R0S1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Atf7Q8R0S1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Atf7Q8R0S1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Atf7Q8R0S1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
Atf7Q8R0S1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC24.15■■□□□ 1.46
Atf7Q8R0S1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Atf7Q8R0S1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Atf7Q8R0S1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Atf7Q8R0S1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Atf7Q8R0S1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
Atf7Q8R0S1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Atf7Q8R0S1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Atf7Q8R0S1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC24.14■■□□□ 1.45
Atf7Q8R0S1 Gm7417-201ENSMUST00000192950 473 ntBASIC24.14■■□□□ 1.45
Atf7Q8R0S1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC24.14■■□□□ 1.45
Atf7Q8R0S1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Atf7Q8R0S1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Atf7Q8R0S1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Atf7Q8R0S1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Atf7Q8R0S1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Atf7Q8R0S1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Atf7Q8R0S1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Atf7Q8R0S1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Atf7Q8R0S1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Atf7Q8R0S1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Atf7Q8R0S1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC24.13■■□□□ 1.45
Atf7Q8R0S1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Atf7Q8R0S1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Atf7Q8R0S1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Atf7Q8R0S1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Atf7Q8R0S1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Atf7Q8R0S1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Atf7Q8R0S1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Atf7Q8R0S1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Atf7Q8R0S1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Atf7Q8R0S1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Atf7Q8R0S1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC24.11■■□□□ 1.45
Atf7Q8R0S1 Etf1-202ENSMUST00000180351 108 ntBASIC24.11■■□□□ 1.45
Atf7Q8R0S1 Gm9959-201ENSMUST00000068277 390 ntBASIC24.11■■□□□ 1.45
Atf7Q8R0S1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC24.11■■□□□ 1.45
Atf7Q8R0S1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Atf7Q8R0S1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Atf7Q8R0S1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Atf7Q8R0S1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.1■■□□□ 1.45
Atf7Q8R0S1 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.1■■□□□ 1.45
Atf7Q8R0S1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Atf7Q8R0S1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Atf7Q8R0S1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC24.1■■□□□ 1.45
Atf7Q8R0S1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Atf7Q8R0S1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Atf7Q8R0S1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Atf7Q8R0S1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Atf7Q8R0S1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Atf7Q8R0S1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Atf7Q8R0S1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Atf7Q8R0S1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Atf7Q8R0S1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Atf7Q8R0S1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Atf7Q8R0S1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Atf7Q8R0S1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Atf7Q8R0S1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Atf7Q8R0S1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Atf7Q8R0S1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Atf7Q8R0S1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
Atf7Q8R0S1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Atf7Q8R0S1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC24.08■■□□□ 1.44
Atf7Q8R0S1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC24.07■■□□□ 1.44
Atf7Q8R0S1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms