Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmgcll1Q8JZS7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmgcll1Q8JZS7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmgcll1Q8JZS7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.18■□□□□ 0.98
Hmgcll1Q8JZS7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmgcll1Q8JZS7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.18■□□□□ 0.98
Hmgcll1Q8JZS7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmgcll1Q8JZS7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hmgcll1Q8JZS7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmgcll1Q8JZS7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.17■□□□□ 0.98
Hmgcll1Q8JZS7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Hmgcll1Q8JZS7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmgcll1Q8JZS7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.17■□□□□ 0.98
Hmgcll1Q8JZS7 Gm43137-201ENSMUST00000198052 594 ntBASIC21.17■□□□□ 0.98
Hmgcll1Q8JZS7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmgcll1Q8JZS7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.17■□□□□ 0.98
Hmgcll1Q8JZS7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Hmgcll1Q8JZS7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmgcll1Q8JZS7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmgcll1Q8JZS7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmgcll1Q8JZS7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmgcll1Q8JZS7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmgcll1Q8JZS7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmgcll1Q8JZS7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.16■□□□□ 0.98
Hmgcll1Q8JZS7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmgcll1Q8JZS7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmgcll1Q8JZS7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmgcll1Q8JZS7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hmgcll1Q8JZS7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmgcll1Q8JZS7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Hmgcll1Q8JZS7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.15■□□□□ 0.98
Hmgcll1Q8JZS7 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.15■□□□□ 0.98
Hmgcll1Q8JZS7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmgcll1Q8JZS7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
Hmgcll1Q8JZS7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmgcll1Q8JZS7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hmgcll1Q8JZS7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Hmgcll1Q8JZS7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hmgcll1Q8JZS7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.14■□□□□ 0.98
Hmgcll1Q8JZS7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Hmgcll1Q8JZS7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hmgcll1Q8JZS7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.14■□□□□ 0.97
Hmgcll1Q8JZS7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.14■□□□□ 0.97
Hmgcll1Q8JZS7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Hmgcll1Q8JZS7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmgcll1Q8JZS7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hmgcll1Q8JZS7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmgcll1Q8JZS7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgcll1Q8JZS7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Hmgcll1Q8JZS7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgcll1Q8JZS7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgcll1Q8JZS7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgcll1Q8JZS7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.12■□□□□ 0.97
Hmgcll1Q8JZS7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgcll1Q8JZS7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgcll1Q8JZS7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgcll1Q8JZS7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgcll1Q8JZS7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgcll1Q8JZS7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.11■□□□□ 0.97
Hmgcll1Q8JZS7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgcll1Q8JZS7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Hmgcll1Q8JZS7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgcll1Q8JZS7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.1■□□□□ 0.97
Hmgcll1Q8JZS7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgcll1Q8JZS7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgcll1Q8JZS7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Hmgcll1Q8JZS7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgcll1Q8JZS7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgcll1Q8JZS7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgcll1Q8JZS7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgcll1Q8JZS7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.09■□□□□ 0.97
Hmgcll1Q8JZS7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Hmgcll1Q8JZS7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgcll1Q8JZS7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgcll1Q8JZS7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgcll1Q8JZS7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Hmgcll1Q8JZS7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Hmgcll1Q8JZS7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmgcll1Q8JZS7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.08■□□□□ 0.97
Hmgcll1Q8JZS7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Hmgcll1Q8JZS7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Hmgcll1Q8JZS7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hmgcll1Q8JZS7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgcll1Q8JZS7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgcll1Q8JZS7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgcll1Q8JZS7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgcll1Q8JZS7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.07■□□□□ 0.96
Hmgcll1Q8JZS7 Gm6139-201ENSMUST00000079261 882 ntBASIC21.07■□□□□ 0.96
Hmgcll1Q8JZS7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgcll1Q8JZS7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgcll1Q8JZS7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgcll1Q8JZS7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Hmgcll1Q8JZS7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgcll1Q8JZS7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgcll1Q8JZS7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.06■□□□□ 0.96
Hmgcll1Q8JZS7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.06■□□□□ 0.96
Hmgcll1Q8JZS7 Mir7075-201ENSMUST00000184187 82 ntBASIC21.06■□□□□ 0.96
Hmgcll1Q8JZS7 Serp2-204ENSMUST00000228055 705 ntBASIC21.06■□□□□ 0.96
Hmgcll1Q8JZS7 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.06■□□□□ 0.96
Hmgcll1Q8JZS7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms