Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim61Q8JZK6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim61Q8JZK6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim61Q8JZK6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim61Q8JZK6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Trim61Q8JZK6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Trim61Q8JZK6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim61Q8JZK6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim61Q8JZK6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.53■■□□□ 1.04
Trim61Q8JZK6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim61Q8JZK6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim61Q8JZK6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.53■■□□□ 1.04
Trim61Q8JZK6 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.53■■□□□ 1.04
Trim61Q8JZK6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Trim61Q8JZK6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim61Q8JZK6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.53■■□□□ 1.04
Trim61Q8JZK6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Trim61Q8JZK6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim61Q8JZK6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Trim61Q8JZK6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim61Q8JZK6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trim61Q8JZK6 Gm8493-201ENSMUST00000196881 489 ntBASIC21.52■■□□□ 1.04
Trim61Q8JZK6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim61Q8JZK6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Trim61Q8JZK6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim61Q8JZK6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.51■■□□□ 1.03
Trim61Q8JZK6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim61Q8JZK6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim61Q8JZK6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.51■■□□□ 1.03
Trim61Q8JZK6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
Trim61Q8JZK6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.5■■□□□ 1.03
Trim61Q8JZK6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.5■■□□□ 1.03
Trim61Q8JZK6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
Trim61Q8JZK6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim61Q8JZK6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim61Q8JZK6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim61Q8JZK6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim61Q8JZK6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Trim61Q8JZK6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Trim61Q8JZK6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Trim61Q8JZK6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim61Q8JZK6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim61Q8JZK6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim61Q8JZK6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim61Q8JZK6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.49■■□□□ 1.03
Trim61Q8JZK6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim61Q8JZK6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim61Q8JZK6 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim61Q8JZK6 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.48■■□□□ 1.03
Trim61Q8JZK6 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.48■■□□□ 1.03
Trim61Q8JZK6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Trim61Q8JZK6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim61Q8JZK6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Trim61Q8JZK6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim61Q8JZK6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim61Q8JZK6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim61Q8JZK6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim61Q8JZK6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim61Q8JZK6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim61Q8JZK6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim61Q8JZK6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim61Q8JZK6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.47■■□□□ 1.03
Trim61Q8JZK6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim61Q8JZK6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Trim61Q8JZK6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim61Q8JZK6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim61Q8JZK6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim61Q8JZK6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim61Q8JZK6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim61Q8JZK6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Trim61Q8JZK6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim61Q8JZK6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim61Q8JZK6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim61Q8JZK6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.45■■□□□ 1.02
Trim61Q8JZK6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim61Q8JZK6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim61Q8JZK6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim61Q8JZK6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim61Q8JZK6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim61Q8JZK6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Trim61Q8JZK6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
Trim61Q8JZK6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim61Q8JZK6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim61Q8JZK6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim61Q8JZK6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.44■■□□□ 1.02
Trim61Q8JZK6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim61Q8JZK6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim61Q8JZK6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.44■■□□□ 1.02
Trim61Q8JZK6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.44■■□□□ 1.02
Trim61Q8JZK6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Trim61Q8JZK6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim61Q8JZK6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.43■■□□□ 1.02
Trim61Q8JZK6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Trim61Q8JZK6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim61Q8JZK6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim61Q8JZK6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim61Q8JZK6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim61Q8JZK6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Trim61Q8JZK6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim61Q8JZK6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms