Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfwd3Q8CIK8 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.15■□□□□ 0.66
Rfwd3Q8CIK8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfwd3Q8CIK8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rfwd3Q8CIK8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rfwd3Q8CIK8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rfwd3Q8CIK8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.14■□□□□ 0.65
Rfwd3Q8CIK8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rfwd3Q8CIK8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfwd3Q8CIK8 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.14■□□□□ 0.65
Rfwd3Q8CIK8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfwd3Q8CIK8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfwd3Q8CIK8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfwd3Q8CIK8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.13■□□□□ 0.65
Rfwd3Q8CIK8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rfwd3Q8CIK8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfwd3Q8CIK8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfwd3Q8CIK8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfwd3Q8CIK8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfwd3Q8CIK8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rfwd3Q8CIK8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfwd3Q8CIK8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rfwd3Q8CIK8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfwd3Q8CIK8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rfwd3Q8CIK8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rfwd3Q8CIK8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfwd3Q8CIK8 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.12■□□□□ 0.65
Rfwd3Q8CIK8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.12■□□□□ 0.65
Rfwd3Q8CIK8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfwd3Q8CIK8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfwd3Q8CIK8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.12■□□□□ 0.65
Rfwd3Q8CIK8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfwd3Q8CIK8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
Rfwd3Q8CIK8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfwd3Q8CIK8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rfwd3Q8CIK8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.12■□□□□ 0.65
Rfwd3Q8CIK8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfwd3Q8CIK8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfwd3Q8CIK8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Rfwd3Q8CIK8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rfwd3Q8CIK8 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.11■□□□□ 0.65
Rfwd3Q8CIK8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rfwd3Q8CIK8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Rfwd3Q8CIK8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfwd3Q8CIK8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfwd3Q8CIK8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.11■□□□□ 0.65
Rfwd3Q8CIK8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rfwd3Q8CIK8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Rfwd3Q8CIK8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfwd3Q8CIK8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.1■□□□□ 0.65
Rfwd3Q8CIK8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rfwd3Q8CIK8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Rfwd3Q8CIK8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.1■□□□□ 0.65
Rfwd3Q8CIK8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Rfwd3Q8CIK8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Rfwd3Q8CIK8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfwd3Q8CIK8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfwd3Q8CIK8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfwd3Q8CIK8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfwd3Q8CIK8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfwd3Q8CIK8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfwd3Q8CIK8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfwd3Q8CIK8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rfwd3Q8CIK8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rfwd3Q8CIK8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.09■□□□□ 0.65
Rfwd3Q8CIK8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfwd3Q8CIK8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
Rfwd3Q8CIK8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfwd3Q8CIK8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Rfwd3Q8CIK8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Rfwd3Q8CIK8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfwd3Q8CIK8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.08■□□□□ 0.64
Rfwd3Q8CIK8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.08■□□□□ 0.64
Rfwd3Q8CIK8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Rfwd3Q8CIK8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfwd3Q8CIK8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfwd3Q8CIK8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfwd3Q8CIK8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfwd3Q8CIK8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rfwd3Q8CIK8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfwd3Q8CIK8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rfwd3Q8CIK8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfwd3Q8CIK8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rfwd3Q8CIK8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.06■□□□□ 0.64
Rfwd3Q8CIK8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfwd3Q8CIK8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Rfwd3Q8CIK8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfwd3Q8CIK8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
Rfwd3Q8CIK8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfwd3Q8CIK8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfwd3Q8CIK8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfwd3Q8CIK8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfwd3Q8CIK8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rfwd3Q8CIK8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfwd3Q8CIK8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfwd3Q8CIK8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.05■□□□□ 0.64
Rfwd3Q8CIK8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Rfwd3Q8CIK8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfwd3Q8CIK8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfwd3Q8CIK8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms