Protein–RNA interactions for Protein: Q8CII9

Crlf2, Cytokine receptor-like factor 2, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf2Q8CII9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC22.21■■□□□ 1.15
Crlf2Q8CII9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Crlf2Q8CII9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Crlf2Q8CII9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Crlf2Q8CII9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Crlf2Q8CII9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.21■■□□□ 1.15
Crlf2Q8CII9 Mir5133-201ENSMUST00000174955 77 ntBASIC22.2■■□□□ 1.14
Crlf2Q8CII9 Mir6982-201ENSMUST00000184354 68 ntBASIC22.2■■□□□ 1.14
Crlf2Q8CII9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Crlf2Q8CII9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Crlf2Q8CII9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Crlf2Q8CII9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Crlf2Q8CII9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Crlf2Q8CII9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Crlf2Q8CII9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Crlf2Q8CII9 Gm11421-201ENSMUST00000122124 294 ntBASIC22.19■■□□□ 1.14
Crlf2Q8CII9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Crlf2Q8CII9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Crlf2Q8CII9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Crlf2Q8CII9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Crlf2Q8CII9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Crlf2Q8CII9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Crlf2Q8CII9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Crlf2Q8CII9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Crlf2Q8CII9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.18■■□□□ 1.14
Crlf2Q8CII9 Gm12527-201ENSMUST00000117967 564 ntBASIC22.18■■□□□ 1.14
Crlf2Q8CII9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
Crlf2Q8CII9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.18■■□□□ 1.14
Crlf2Q8CII9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC22.18■■□□□ 1.14
Crlf2Q8CII9 Gm43530-201ENSMUST00000195920 274 ntBASIC22.18■■□□□ 1.14
Crlf2Q8CII9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC22.18■■□□□ 1.14
Crlf2Q8CII9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.18■■□□□ 1.14
Crlf2Q8CII9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Crlf2Q8CII9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Crlf2Q8CII9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC22.17■■□□□ 1.14
Crlf2Q8CII9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Crlf2Q8CII9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC22.17■■□□□ 1.14
Crlf2Q8CII9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Crlf2Q8CII9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Crlf2Q8CII9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Crlf2Q8CII9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC22.16■■□□□ 1.14
Crlf2Q8CII9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Crlf2Q8CII9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Crlf2Q8CII9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Crlf2Q8CII9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC22.16■■□□□ 1.14
Crlf2Q8CII9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Crlf2Q8CII9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Crlf2Q8CII9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.16■■□□□ 1.14
Crlf2Q8CII9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Crlf2Q8CII9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Crlf2Q8CII9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Crlf2Q8CII9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC22.15■■□□□ 1.14
Crlf2Q8CII9 Gm13168-201ENSMUST00000121771 632 ntBASIC22.15■■□□□ 1.14
Crlf2Q8CII9 Gm3807-201ENSMUST00000193520 1168 ntBASIC22.15■■□□□ 1.14
Crlf2Q8CII9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Crlf2Q8CII9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Crlf2Q8CII9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Crlf2Q8CII9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Crlf2Q8CII9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Crlf2Q8CII9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Crlf2Q8CII9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Crlf2Q8CII9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
Crlf2Q8CII9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.14■■□□□ 1.13
Crlf2Q8CII9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Crlf2Q8CII9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Crlf2Q8CII9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Crlf2Q8CII9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Crlf2Q8CII9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Crlf2Q8CII9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Crlf2Q8CII9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Crlf2Q8CII9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Crlf2Q8CII9 Gm10812-201ENSMUST00000099864 546 ntBASIC22.13■■□□□ 1.13
Crlf2Q8CII9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Crlf2Q8CII9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Crlf2Q8CII9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.12■■□□□ 1.13
Crlf2Q8CII9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Crlf2Q8CII9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Crlf2Q8CII9 Gm13234-201ENSMUST00000120010 747 ntBASIC22.12■■□□□ 1.13
Crlf2Q8CII9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC22.12■■□□□ 1.13
Crlf2Q8CII9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Crlf2Q8CII9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Crlf2Q8CII9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Crlf2Q8CII9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Crlf2Q8CII9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Crlf2Q8CII9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Crlf2Q8CII9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Crlf2Q8CII9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Crlf2Q8CII9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Crlf2Q8CII9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC22.09■■□□□ 1.13
Crlf2Q8CII9 Gm7514-201ENSMUST00000209475 934 ntBASIC22.09■■□□□ 1.13
Crlf2Q8CII9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Crlf2Q8CII9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC22.09■■□□□ 1.13
Crlf2Q8CII9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Crlf2Q8CII9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Crlf2Q8CII9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Crlf2Q8CII9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC22.09■■□□□ 1.13
Crlf2Q8CII9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Crlf2Q8CII9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Crlf2Q8CII9 Gm13836-201ENSMUST00000121159 501 ntBASIC22.08■■□□□ 1.13
Crlf2Q8CII9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC22.08■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms