Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CopaQ8CIE6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CopaQ8CIE6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CopaQ8CIE6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CopaQ8CIE6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CopaQ8CIE6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.75■□□□□ 0.91
CopaQ8CIE6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CopaQ8CIE6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.75■□□□□ 0.91
CopaQ8CIE6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CopaQ8CIE6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CopaQ8CIE6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CopaQ8CIE6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CopaQ8CIE6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CopaQ8CIE6 Gm12922-201ENSMUST00000120626 809 ntBASIC20.74■□□□□ 0.91
CopaQ8CIE6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CopaQ8CIE6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CopaQ8CIE6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CopaQ8CIE6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CopaQ8CIE6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CopaQ8CIE6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CopaQ8CIE6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CopaQ8CIE6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
CopaQ8CIE6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CopaQ8CIE6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CopaQ8CIE6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CopaQ8CIE6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CopaQ8CIE6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CopaQ8CIE6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
CopaQ8CIE6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CopaQ8CIE6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CopaQ8CIE6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CopaQ8CIE6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CopaQ8CIE6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CopaQ8CIE6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CopaQ8CIE6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CopaQ8CIE6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
CopaQ8CIE6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CopaQ8CIE6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.72■□□□□ 0.91
CopaQ8CIE6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CopaQ8CIE6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
CopaQ8CIE6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CopaQ8CIE6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CopaQ8CIE6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CopaQ8CIE6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CopaQ8CIE6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CopaQ8CIE6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CopaQ8CIE6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CopaQ8CIE6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CopaQ8CIE6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CopaQ8CIE6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CopaQ8CIE6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CopaQ8CIE6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CopaQ8CIE6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.7■□□□□ 0.9
CopaQ8CIE6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CopaQ8CIE6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.7■□□□□ 0.9
CopaQ8CIE6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CopaQ8CIE6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CopaQ8CIE6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.7■□□□□ 0.9
CopaQ8CIE6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CopaQ8CIE6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CopaQ8CIE6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CopaQ8CIE6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CopaQ8CIE6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CopaQ8CIE6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CopaQ8CIE6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.69■□□□□ 0.9
CopaQ8CIE6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CopaQ8CIE6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CopaQ8CIE6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CopaQ8CIE6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.69■□□□□ 0.9
CopaQ8CIE6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CopaQ8CIE6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CopaQ8CIE6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.68■□□□□ 0.9
CopaQ8CIE6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.68■□□□□ 0.9
CopaQ8CIE6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CopaQ8CIE6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CopaQ8CIE6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CopaQ8CIE6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CopaQ8CIE6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CopaQ8CIE6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CopaQ8CIE6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CopaQ8CIE6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.67■□□□□ 0.9
CopaQ8CIE6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CopaQ8CIE6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CopaQ8CIE6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CopaQ8CIE6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CopaQ8CIE6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CopaQ8CIE6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CopaQ8CIE6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CopaQ8CIE6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CopaQ8CIE6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.66■□□□□ 0.9
CopaQ8CIE6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.66■□□□□ 0.9
CopaQ8CIE6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.66■□□□□ 0.9
CopaQ8CIE6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CopaQ8CIE6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CopaQ8CIE6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CopaQ8CIE6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CopaQ8CIE6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CopaQ8CIE6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
CopaQ8CIE6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CopaQ8CIE6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms