Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Gm43017-201ENSMUST00000198296 752 ntBASIC26.87■■□□□ 1.89
Rsph6aQ8CDR2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC26.86■■□□□ 1.89
Rsph6aQ8CDR2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rsph6aQ8CDR2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC26.86■■□□□ 1.89
Rsph6aQ8CDR2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC26.86■■□□□ 1.89
Rsph6aQ8CDR2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC26.86■■□□□ 1.89
Rsph6aQ8CDR2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Rsph6aQ8CDR2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rsph6aQ8CDR2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
Rsph6aQ8CDR2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Rsph6aQ8CDR2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC26.85■■□□□ 1.89
Rsph6aQ8CDR2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Rsph6aQ8CDR2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC26.85■■□□□ 1.89
Rsph6aQ8CDR2 Gm8493-201ENSMUST00000196881 489 ntBASIC26.85■■□□□ 1.89
Rsph6aQ8CDR2 Wdr70-203ENSMUST00000227371 1130 ntBASIC26.85■■□□□ 1.89
Rsph6aQ8CDR2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Rsph6aQ8CDR2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Rsph6aQ8CDR2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rsph6aQ8CDR2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rsph6aQ8CDR2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC26.84■■□□□ 1.89
Rsph6aQ8CDR2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC26.84■■□□□ 1.89
Rsph6aQ8CDR2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rsph6aQ8CDR2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rsph6aQ8CDR2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rsph6aQ8CDR2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC26.84■■□□□ 1.89
Rsph6aQ8CDR2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
Rsph6aQ8CDR2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC26.84■■□□□ 1.89
Rsph6aQ8CDR2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rsph6aQ8CDR2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rsph6aQ8CDR2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
Rsph6aQ8CDR2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
Rsph6aQ8CDR2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Rsph6aQ8CDR2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Rsph6aQ8CDR2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC26.83■■□□□ 1.89
Rsph6aQ8CDR2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Rsph6aQ8CDR2 Gm6085-201ENSMUST00000182774 1470 ntBASIC26.82■■□□□ 1.88
Rsph6aQ8CDR2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC26.82■■□□□ 1.88
Rsph6aQ8CDR2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rsph6aQ8CDR2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC26.82■■□□□ 1.88
Rsph6aQ8CDR2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC26.82■■□□□ 1.88
Rsph6aQ8CDR2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rsph6aQ8CDR2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rsph6aQ8CDR2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Rsph6aQ8CDR2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
Rsph6aQ8CDR2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rsph6aQ8CDR2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rsph6aQ8CDR2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
Rsph6aQ8CDR2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rsph6aQ8CDR2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rsph6aQ8CDR2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Rsph6aQ8CDR2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rsph6aQ8CDR2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Rsph6aQ8CDR2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
Rsph6aQ8CDR2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
Rsph6aQ8CDR2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rsph6aQ8CDR2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rsph6aQ8CDR2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
Rsph6aQ8CDR2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Rsph6aQ8CDR2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC26.79■■□□□ 1.88
Rsph6aQ8CDR2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC26.79■■□□□ 1.88
Rsph6aQ8CDR2 Gm21168-201ENSMUST00000199646 1096 ntBASIC26.79■■□□□ 1.88
Rsph6aQ8CDR2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC26.79■■□□□ 1.88
Rsph6aQ8CDR2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC26.79■■□□□ 1.88
Rsph6aQ8CDR2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rsph6aQ8CDR2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rsph6aQ8CDR2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC26.78■■□□□ 1.88
Rsph6aQ8CDR2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Rsph6aQ8CDR2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rsph6aQ8CDR2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rsph6aQ8CDR2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rsph6aQ8CDR2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rsph6aQ8CDR2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rsph6aQ8CDR2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rsph6aQ8CDR2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Rsph6aQ8CDR2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC26.76■■□□□ 1.87
Rsph6aQ8CDR2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Rsph6aQ8CDR2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC26.76■■□□□ 1.87
Rsph6aQ8CDR2 Spcs1-204ENSMUST00000226782 949 ntBASIC26.76■■□□□ 1.87
Rsph6aQ8CDR2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Rsph6aQ8CDR2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Rsph6aQ8CDR2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rsph6aQ8CDR2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC26.75■■□□□ 1.87
Rsph6aQ8CDR2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC26.75■■□□□ 1.87
Rsph6aQ8CDR2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rsph6aQ8CDR2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rsph6aQ8CDR2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rsph6aQ8CDR2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC26.75■■□□□ 1.87
Rsph6aQ8CDR2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC26.74■■□□□ 1.87
Rsph6aQ8CDR2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC26.74■■□□□ 1.87
Rsph6aQ8CDR2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Rsph6aQ8CDR2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Rsph6aQ8CDR2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Rsph6aQ8CDR2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rsph6aQ8CDR2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Rsph6aQ8CDR2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rsph6aQ8CDR2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rsph6aQ8CDR2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rsph6aQ8CDR2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Rsph6aQ8CDR2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Rsph6aQ8CDR2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms