Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.96■■□□□ 1.11
Vcpip1Q8CDG3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Vcpip1Q8CDG3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vcpip1Q8CDG3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vcpip1Q8CDG3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Vcpip1Q8CDG3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Vcpip1Q8CDG3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vcpip1Q8CDG3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vcpip1Q8CDG3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vcpip1Q8CDG3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Vcpip1Q8CDG3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vcpip1Q8CDG3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vcpip1Q8CDG3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Vcpip1Q8CDG3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vcpip1Q8CDG3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vcpip1Q8CDG3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Vcpip1Q8CDG3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vcpip1Q8CDG3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vcpip1Q8CDG3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vcpip1Q8CDG3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vcpip1Q8CDG3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vcpip1Q8CDG3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vcpip1Q8CDG3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vcpip1Q8CDG3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.94■■□□□ 1.1
Vcpip1Q8CDG3 Rps24-207ENSMUST00000224568 714 ntBASIC21.94■■□□□ 1.1
Vcpip1Q8CDG3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Vcpip1Q8CDG3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
Vcpip1Q8CDG3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vcpip1Q8CDG3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vcpip1Q8CDG3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.93■■□□□ 1.1
Vcpip1Q8CDG3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vcpip1Q8CDG3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Vcpip1Q8CDG3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Vcpip1Q8CDG3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vcpip1Q8CDG3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vcpip1Q8CDG3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Vcpip1Q8CDG3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.92■■□□□ 1.1
Vcpip1Q8CDG3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.92■■□□□ 1.1
Vcpip1Q8CDG3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vcpip1Q8CDG3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.92■■□□□ 1.1
Vcpip1Q8CDG3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vcpip1Q8CDG3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vcpip1Q8CDG3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vcpip1Q8CDG3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vcpip1Q8CDG3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.92■■□□□ 1.1
Vcpip1Q8CDG3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vcpip1Q8CDG3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vcpip1Q8CDG3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Vcpip1Q8CDG3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
Vcpip1Q8CDG3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vcpip1Q8CDG3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Vcpip1Q8CDG3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vcpip1Q8CDG3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Vcpip1Q8CDG3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Vcpip1Q8CDG3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vcpip1Q8CDG3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Vcpip1Q8CDG3 Gm15820-201ENSMUST00000201566 728 ntBASIC21.91■■□□□ 1.1
Vcpip1Q8CDG3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vcpip1Q8CDG3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vcpip1Q8CDG3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vcpip1Q8CDG3 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.9■■□□□ 1.1
Vcpip1Q8CDG3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Vcpip1Q8CDG3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Vcpip1Q8CDG3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vcpip1Q8CDG3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Vcpip1Q8CDG3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vcpip1Q8CDG3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vcpip1Q8CDG3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.89■■□□□ 1.09
Vcpip1Q8CDG3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Vcpip1Q8CDG3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vcpip1Q8CDG3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vcpip1Q8CDG3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vcpip1Q8CDG3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Vcpip1Q8CDG3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vcpip1Q8CDG3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Vcpip1Q8CDG3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vcpip1Q8CDG3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.88■■□□□ 1.09
Vcpip1Q8CDG3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vcpip1Q8CDG3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Vcpip1Q8CDG3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.87■■□□□ 1.09
Vcpip1Q8CDG3 Golph3-202ENSMUST00000226517 2359 ntBASIC21.87■■□□□ 1.09
Vcpip1Q8CDG3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vcpip1Q8CDG3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vcpip1Q8CDG3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Vcpip1Q8CDG3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vcpip1Q8CDG3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vcpip1Q8CDG3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.87■■□□□ 1.09
Vcpip1Q8CDG3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Vcpip1Q8CDG3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vcpip1Q8CDG3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vcpip1Q8CDG3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vcpip1Q8CDG3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.86■■□□□ 1.09
Vcpip1Q8CDG3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.86■■□□□ 1.09
Vcpip1Q8CDG3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vcpip1Q8CDG3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vcpip1Q8CDG3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vcpip1Q8CDG3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vcpip1Q8CDG3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vcpip1Q8CDG3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
Vcpip1Q8CDG3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms