Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SynpoQ8CC35 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SynpoQ8CC35 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SynpoQ8CC35 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.64■□□□□ 0.73
SynpoQ8CC35 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SynpoQ8CC35 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SynpoQ8CC35 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SynpoQ8CC35 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SynpoQ8CC35 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SynpoQ8CC35 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SynpoQ8CC35 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SynpoQ8CC35 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SynpoQ8CC35 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SynpoQ8CC35 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SynpoQ8CC35 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SynpoQ8CC35 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SynpoQ8CC35 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
SynpoQ8CC35 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SynpoQ8CC35 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
SynpoQ8CC35 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SynpoQ8CC35 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SynpoQ8CC35 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SynpoQ8CC35 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.61■□□□□ 0.73
SynpoQ8CC35 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.61■□□□□ 0.73
SynpoQ8CC35 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SynpoQ8CC35 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SynpoQ8CC35 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SynpoQ8CC35 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SynpoQ8CC35 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
SynpoQ8CC35 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SynpoQ8CC35 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.6■□□□□ 0.73
SynpoQ8CC35 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SynpoQ8CC35 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SynpoQ8CC35 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.6■□□□□ 0.73
SynpoQ8CC35 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SynpoQ8CC35 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SynpoQ8CC35 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SynpoQ8CC35 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
SynpoQ8CC35 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SynpoQ8CC35 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SynpoQ8CC35 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.59■□□□□ 0.73
SynpoQ8CC35 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SynpoQ8CC35 Gm12922-201ENSMUST00000120626 809 ntBASIC19.59■□□□□ 0.73
SynpoQ8CC35 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.59■□□□□ 0.73
SynpoQ8CC35 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
SynpoQ8CC35 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SynpoQ8CC35 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SynpoQ8CC35 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SynpoQ8CC35 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SynpoQ8CC35 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SynpoQ8CC35 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SynpoQ8CC35 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SynpoQ8CC35 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SynpoQ8CC35 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SynpoQ8CC35 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SynpoQ8CC35 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SynpoQ8CC35 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SynpoQ8CC35 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SynpoQ8CC35 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SynpoQ8CC35 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.57■□□□□ 0.72
SynpoQ8CC35 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.57■□□□□ 0.72
SynpoQ8CC35 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SynpoQ8CC35 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SynpoQ8CC35 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SynpoQ8CC35 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SynpoQ8CC35 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SynpoQ8CC35 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SynpoQ8CC35 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.57■□□□□ 0.72
SynpoQ8CC35 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SynpoQ8CC35 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SynpoQ8CC35 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SynpoQ8CC35 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
SynpoQ8CC35 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SynpoQ8CC35 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.56■□□□□ 0.72
SynpoQ8CC35 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SynpoQ8CC35 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SynpoQ8CC35 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SynpoQ8CC35 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.56■□□□□ 0.72
SynpoQ8CC35 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SynpoQ8CC35 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SynpoQ8CC35 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SynpoQ8CC35 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SynpoQ8CC35 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SynpoQ8CC35 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
SynpoQ8CC35 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.55■□□□□ 0.72
SynpoQ8CC35 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.55■□□□□ 0.72
SynpoQ8CC35 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
SynpoQ8CC35 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
SynpoQ8CC35 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SynpoQ8CC35 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SynpoQ8CC35 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SynpoQ8CC35 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SynpoQ8CC35 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SynpoQ8CC35 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SynpoQ8CC35 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SynpoQ8CC35 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.54■□□□□ 0.72
SynpoQ8CC35 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SynpoQ8CC35 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.54■□□□□ 0.72
SynpoQ8CC35 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SynpoQ8CC35 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms