Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm11Q8BUV6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm11Q8BUV6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm11Q8BUV6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm11Q8BUV6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm11Q8BUV6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.38■□□□□ 0.37
Lsm11Q8BUV6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm11Q8BUV6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm11Q8BUV6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm11Q8BUV6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Lsm11Q8BUV6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm11Q8BUV6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm11Q8BUV6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm11Q8BUV6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.37■□□□□ 0.37
Lsm11Q8BUV6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm11Q8BUV6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm11Q8BUV6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm11Q8BUV6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm11Q8BUV6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm11Q8BUV6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Lsm11Q8BUV6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm11Q8BUV6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.36■□□□□ 0.37
Lsm11Q8BUV6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm11Q8BUV6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.36■□□□□ 0.37
Lsm11Q8BUV6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm11Q8BUV6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.36■□□□□ 0.37
Lsm11Q8BUV6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.36■□□□□ 0.37
Lsm11Q8BUV6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm11Q8BUV6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm11Q8BUV6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm11Q8BUV6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm11Q8BUV6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm11Q8BUV6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.36■□□□□ 0.37
Lsm11Q8BUV6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm11Q8BUV6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm11Q8BUV6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm11Q8BUV6 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.35■□□□□ 0.37
Lsm11Q8BUV6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm11Q8BUV6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm11Q8BUV6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.35■□□□□ 0.37
Lsm11Q8BUV6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm11Q8BUV6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm11Q8BUV6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm11Q8BUV6 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.34■□□□□ 0.37
Lsm11Q8BUV6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm11Q8BUV6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm11Q8BUV6 Gm14523-201ENSMUST00000117260 558 ntBASIC17.34■□□□□ 0.37
Lsm11Q8BUV6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.34■□□□□ 0.37
Lsm11Q8BUV6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.34■□□□□ 0.37
Lsm11Q8BUV6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm11Q8BUV6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm11Q8BUV6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm11Q8BUV6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm11Q8BUV6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm11Q8BUV6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Lsm11Q8BUV6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lsm11Q8BUV6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Lsm11Q8BUV6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Lsm11Q8BUV6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm11Q8BUV6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm11Q8BUV6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm11Q8BUV6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.33■□□□□ 0.36
Lsm11Q8BUV6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm11Q8BUV6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Lsm11Q8BUV6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.32■□□□□ 0.36
Lsm11Q8BUV6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.32■□□□□ 0.36
Lsm11Q8BUV6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Lsm11Q8BUV6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm11Q8BUV6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.32■□□□□ 0.36
Lsm11Q8BUV6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm11Q8BUV6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm11Q8BUV6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm11Q8BUV6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm11Q8BUV6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm11Q8BUV6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.31■□□□□ 0.36
Lsm11Q8BUV6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.31■□□□□ 0.36
Lsm11Q8BUV6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm11Q8BUV6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm11Q8BUV6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm11Q8BUV6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Lsm11Q8BUV6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm11Q8BUV6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Lsm11Q8BUV6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm11Q8BUV6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm11Q8BUV6 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.3■□□□□ 0.36
Lsm11Q8BUV6 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.3■□□□□ 0.36
Lsm11Q8BUV6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.3■□□□□ 0.36
Lsm11Q8BUV6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm11Q8BUV6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm11Q8BUV6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm11Q8BUV6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm11Q8BUV6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm11Q8BUV6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm11Q8BUV6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Lsm11Q8BUV6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm11Q8BUV6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lsm11Q8BUV6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm11Q8BUV6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm11Q8BUV6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Lsm11Q8BUV6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms