Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rd3Q8BRE0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.72■■□□□ 1.07
Rd3Q8BRE0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rd3Q8BRE0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rd3Q8BRE0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rd3Q8BRE0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.72■■□□□ 1.07
Rd3Q8BRE0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.72■■□□□ 1.07
Rd3Q8BRE0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rd3Q8BRE0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Rd3Q8BRE0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Rd3Q8BRE0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rd3Q8BRE0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rd3Q8BRE0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.71■■□□□ 1.07
Rd3Q8BRE0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rd3Q8BRE0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rd3Q8BRE0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.71■■□□□ 1.07
Rd3Q8BRE0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rd3Q8BRE0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rd3Q8BRE0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rd3Q8BRE0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rd3Q8BRE0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rd3Q8BRE0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rd3Q8BRE0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Rd3Q8BRE0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Rd3Q8BRE0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rd3Q8BRE0 Gm12251-201ENSMUST00000117893 792 ntBASIC21.7■■□□□ 1.06
Rd3Q8BRE0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.7■■□□□ 1.06
Rd3Q8BRE0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Rd3Q8BRE0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rd3Q8BRE0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rd3Q8BRE0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.69■■□□□ 1.06
Rd3Q8BRE0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Rd3Q8BRE0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.69■■□□□ 1.06
Rd3Q8BRE0 Gm43530-201ENSMUST00000195920 274 ntBASIC21.69■■□□□ 1.06
Rd3Q8BRE0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rd3Q8BRE0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rd3Q8BRE0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rd3Q8BRE0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rd3Q8BRE0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rd3Q8BRE0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rd3Q8BRE0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rd3Q8BRE0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rd3Q8BRE0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Rd3Q8BRE0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
Rd3Q8BRE0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rd3Q8BRE0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Rd3Q8BRE0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.68■■□□□ 1.06
Rd3Q8BRE0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rd3Q8BRE0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rd3Q8BRE0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rd3Q8BRE0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rd3Q8BRE0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rd3Q8BRE0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rd3Q8BRE0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rd3Q8BRE0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Rd3Q8BRE0 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.67■■□□□ 1.06
Rd3Q8BRE0 Gm43173-201ENSMUST00000202246 593 ntBASIC21.67■■□□□ 1.06
Rd3Q8BRE0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rd3Q8BRE0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rd3Q8BRE0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rd3Q8BRE0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rd3Q8BRE0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.66■■□□□ 1.06
Rd3Q8BRE0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rd3Q8BRE0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rd3Q8BRE0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rd3Q8BRE0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rd3Q8BRE0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Rd3Q8BRE0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rd3Q8BRE0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rd3Q8BRE0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rd3Q8BRE0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rd3Q8BRE0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rd3Q8BRE0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rd3Q8BRE0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rd3Q8BRE0 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.65■■□□□ 1.06
Rd3Q8BRE0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Rd3Q8BRE0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rd3Q8BRE0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rd3Q8BRE0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rd3Q8BRE0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rd3Q8BRE0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rd3Q8BRE0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rd3Q8BRE0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
Rd3Q8BRE0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rd3Q8BRE0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rd3Q8BRE0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rd3Q8BRE0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rd3Q8BRE0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.64■■□□□ 1.05
Rd3Q8BRE0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.64■■□□□ 1.05
Rd3Q8BRE0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rd3Q8BRE0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rd3Q8BRE0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.63■■□□□ 1.05
Rd3Q8BRE0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rd3Q8BRE0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.63■■□□□ 1.05
Rd3Q8BRE0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rd3Q8BRE0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rd3Q8BRE0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rd3Q8BRE0 Gm5874-201ENSMUST00000096101 508 ntBASIC21.63■■□□□ 1.05
Rd3Q8BRE0 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.63■■□□□ 1.05
Rd3Q8BRE0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms