Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smco3Q8BQM7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smco3Q8BQM7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smco3Q8BQM7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smco3Q8BQM7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Smco3Q8BQM7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smco3Q8BQM7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smco3Q8BQM7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smco3Q8BQM7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Smco3Q8BQM7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smco3Q8BQM7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.77■□□□□ 0.28
Smco3Q8BQM7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smco3Q8BQM7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smco3Q8BQM7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Smco3Q8BQM7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smco3Q8BQM7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smco3Q8BQM7 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.77■□□□□ 0.27
Smco3Q8BQM7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smco3Q8BQM7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smco3Q8BQM7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smco3Q8BQM7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smco3Q8BQM7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smco3Q8BQM7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.75■□□□□ 0.27
Smco3Q8BQM7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smco3Q8BQM7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smco3Q8BQM7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smco3Q8BQM7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smco3Q8BQM7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smco3Q8BQM7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smco3Q8BQM7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smco3Q8BQM7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Smco3Q8BQM7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smco3Q8BQM7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Smco3Q8BQM7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smco3Q8BQM7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smco3Q8BQM7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smco3Q8BQM7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smco3Q8BQM7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.74■□□□□ 0.27
Smco3Q8BQM7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.74■□□□□ 0.27
Smco3Q8BQM7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smco3Q8BQM7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smco3Q8BQM7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smco3Q8BQM7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Smco3Q8BQM7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smco3Q8BQM7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smco3Q8BQM7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smco3Q8BQM7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Smco3Q8BQM7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smco3Q8BQM7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smco3Q8BQM7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smco3Q8BQM7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Smco3Q8BQM7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.73■□□□□ 0.27
Smco3Q8BQM7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smco3Q8BQM7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.73■□□□□ 0.27
Smco3Q8BQM7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smco3Q8BQM7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smco3Q8BQM7 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.73■□□□□ 0.27
Smco3Q8BQM7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smco3Q8BQM7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smco3Q8BQM7 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.73■□□□□ 0.27
Smco3Q8BQM7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smco3Q8BQM7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Smco3Q8BQM7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smco3Q8BQM7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smco3Q8BQM7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smco3Q8BQM7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Smco3Q8BQM7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Smco3Q8BQM7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smco3Q8BQM7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smco3Q8BQM7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smco3Q8BQM7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smco3Q8BQM7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Smco3Q8BQM7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.72■□□□□ 0.27
Smco3Q8BQM7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.72■□□□□ 0.27
Smco3Q8BQM7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smco3Q8BQM7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Smco3Q8BQM7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smco3Q8BQM7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smco3Q8BQM7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smco3Q8BQM7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smco3Q8BQM7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smco3Q8BQM7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smco3Q8BQM7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Smco3Q8BQM7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Smco3Q8BQM7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Smco3Q8BQM7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smco3Q8BQM7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smco3Q8BQM7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smco3Q8BQM7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smco3Q8BQM7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.71■□□□□ 0.27
Smco3Q8BQM7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.71■□□□□ 0.27
Smco3Q8BQM7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smco3Q8BQM7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smco3Q8BQM7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smco3Q8BQM7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smco3Q8BQM7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.71■□□□□ 0.26
Smco3Q8BQM7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smco3Q8BQM7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smco3Q8BQM7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smco3Q8BQM7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms