Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdhr3Q8BL00 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdhr3Q8BL00 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdhr3Q8BL00 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdhr3Q8BL00 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdhr3Q8BL00 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.86■□□□□ 0.45
Cdhr3Q8BL00 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdhr3Q8BL00 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.86■□□□□ 0.45
Cdhr3Q8BL00 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdhr3Q8BL00 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cdhr3Q8BL00 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdhr3Q8BL00 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.85■□□□□ 0.45
Cdhr3Q8BL00 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cdhr3Q8BL00 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdhr3Q8BL00 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cdhr3Q8BL00 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.85■□□□□ 0.45
Cdhr3Q8BL00 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cdhr3Q8BL00 Mir6538-201ENSMUST00000183713 110 ntBASIC17.85■□□□□ 0.45
Cdhr3Q8BL00 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdhr3Q8BL00 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdhr3Q8BL00 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.85■□□□□ 0.45
Cdhr3Q8BL00 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.84■□□□□ 0.45
Cdhr3Q8BL00 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdhr3Q8BL00 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdhr3Q8BL00 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdhr3Q8BL00 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdhr3Q8BL00 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Cdhr3Q8BL00 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdhr3Q8BL00 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cdhr3Q8BL00 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdhr3Q8BL00 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdhr3Q8BL00 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdhr3Q8BL00 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdhr3Q8BL00 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdhr3Q8BL00 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdhr3Q8BL00 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdhr3Q8BL00 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdhr3Q8BL00 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdhr3Q8BL00 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cdhr3Q8BL00 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdhr3Q8BL00 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdhr3Q8BL00 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdhr3Q8BL00 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cdhr3Q8BL00 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cdhr3Q8BL00 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr3Q8BL00 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr3Q8BL00 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cdhr3Q8BL00 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.82■□□□□ 0.44
Cdhr3Q8BL00 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr3Q8BL00 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr3Q8BL00 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr3Q8BL00 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr3Q8BL00 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr3Q8BL00 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.82■□□□□ 0.44
Cdhr3Q8BL00 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr3Q8BL00 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr3Q8BL00 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr3Q8BL00 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cdhr3Q8BL00 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdhr3Q8BL00 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cdhr3Q8BL00 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cdhr3Q8BL00 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cdhr3Q8BL00 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdhr3Q8BL00 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdhr3Q8BL00 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdhr3Q8BL00 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdhr3Q8BL00 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdhr3Q8BL00 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdhr3Q8BL00 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdhr3Q8BL00 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdhr3Q8BL00 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdhr3Q8BL00 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdhr3Q8BL00 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdhr3Q8BL00 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdhr3Q8BL00 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.8■□□□□ 0.44
Cdhr3Q8BL00 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.8■□□□□ 0.44
Cdhr3Q8BL00 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cdhr3Q8BL00 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdhr3Q8BL00 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdhr3Q8BL00 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdhr3Q8BL00 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdhr3Q8BL00 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdhr3Q8BL00 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdhr3Q8BL00 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdhr3Q8BL00 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Cdhr3Q8BL00 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.79■□□□□ 0.44
Cdhr3Q8BL00 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdhr3Q8BL00 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.79■□□□□ 0.44
Cdhr3Q8BL00 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdhr3Q8BL00 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdhr3Q8BL00 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdhr3Q8BL00 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdhr3Q8BL00 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdhr3Q8BL00 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cdhr3Q8BL00 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Cdhr3Q8BL00 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.78■□□□□ 0.44
Cdhr3Q8BL00 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.78■□□□□ 0.44
Cdhr3Q8BL00 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdhr3Q8BL00 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdhr3Q8BL00 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms