Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp2bQ8BJF9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Chmp2bQ8BJF9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Chmp2bQ8BJF9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp2bQ8BJF9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp2bQ8BJF9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp2bQ8BJF9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp2bQ8BJF9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Chmp2bQ8BJF9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp2bQ8BJF9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Chmp2bQ8BJF9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp2bQ8BJF9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp2bQ8BJF9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp2bQ8BJF9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Chmp2bQ8BJF9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp2bQ8BJF9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp2bQ8BJF9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.85■□□□□ 0.93
Chmp2bQ8BJF9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.85■□□□□ 0.93
Chmp2bQ8BJF9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp2bQ8BJF9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.85■□□□□ 0.93
Chmp2bQ8BJF9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp2bQ8BJF9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp2bQ8BJF9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Chmp2bQ8BJF9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp2bQ8BJF9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Chmp2bQ8BJF9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp2bQ8BJF9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp2bQ8BJF9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp2bQ8BJF9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp2bQ8BJF9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp2bQ8BJF9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp2bQ8BJF9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.83■□□□□ 0.93
Chmp2bQ8BJF9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Chmp2bQ8BJF9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp2bQ8BJF9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Chmp2bQ8BJF9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chmp2bQ8BJF9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chmp2bQ8BJF9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp2bQ8BJF9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp2bQ8BJF9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp2bQ8BJF9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp2bQ8BJF9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Chmp2bQ8BJF9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp2bQ8BJF9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.82■□□□□ 0.92
Chmp2bQ8BJF9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp2bQ8BJF9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp2bQ8BJF9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp2bQ8BJF9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp2bQ8BJF9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Chmp2bQ8BJF9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp2bQ8BJF9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp2bQ8BJF9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.82■□□□□ 0.92
Chmp2bQ8BJF9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp2bQ8BJF9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp2bQ8BJF9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp2bQ8BJF9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.81■□□□□ 0.92
Chmp2bQ8BJF9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.81■□□□□ 0.92
Chmp2bQ8BJF9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.81■□□□□ 0.92
Chmp2bQ8BJF9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp2bQ8BJF9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp2bQ8BJF9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp2bQ8BJF9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp2bQ8BJF9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp2bQ8BJF9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp2bQ8BJF9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp2bQ8BJF9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp2bQ8BJF9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp2bQ8BJF9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.8■□□□□ 0.92
Chmp2bQ8BJF9 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.8■□□□□ 0.92
Chmp2bQ8BJF9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp2bQ8BJF9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2bQ8BJF9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp2bQ8BJF9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp2bQ8BJF9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp2bQ8BJF9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp2bQ8BJF9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp2bQ8BJF9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp2bQ8BJF9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp2bQ8BJF9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp2bQ8BJF9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms