Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Tdp1Q8BJ37 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Tdp1Q8BJ37 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Tdp1Q8BJ37 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Tdp1Q8BJ37 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Tdp1Q8BJ37 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC22.76■■□□□ 1.23
Tdp1Q8BJ37 Gm26833-201ENSMUST00000180899 440 ntBASIC22.76■■□□□ 1.23
Tdp1Q8BJ37 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Tdp1Q8BJ37 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Tdp1Q8BJ37 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Tdp1Q8BJ37 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Tdp1Q8BJ37 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC22.75■■□□□ 1.23
Tdp1Q8BJ37 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Tdp1Q8BJ37 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Tdp1Q8BJ37 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Tdp1Q8BJ37 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Tdp1Q8BJ37 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Tdp1Q8BJ37 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC22.74■■□□□ 1.23
Tdp1Q8BJ37 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.74■■□□□ 1.23
Tdp1Q8BJ37 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Tdp1Q8BJ37 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Tdp1Q8BJ37 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Tdp1Q8BJ37 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Tdp1Q8BJ37 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Tdp1Q8BJ37 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Tdp1Q8BJ37 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Tdp1Q8BJ37 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Tdp1Q8BJ37 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.73■■□□□ 1.23
Tdp1Q8BJ37 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.73■■□□□ 1.23
Tdp1Q8BJ37 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Tdp1Q8BJ37 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Tdp1Q8BJ37 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.73■■□□□ 1.23
Tdp1Q8BJ37 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.73■■□□□ 1.23
Tdp1Q8BJ37 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Tdp1Q8BJ37 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Tdp1Q8BJ37 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Tdp1Q8BJ37 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Tdp1Q8BJ37 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC22.72■■□□□ 1.23
Tdp1Q8BJ37 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.72■■□□□ 1.23
Tdp1Q8BJ37 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Tdp1Q8BJ37 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tdp1Q8BJ37 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tdp1Q8BJ37 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tdp1Q8BJ37 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tdp1Q8BJ37 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Tdp1Q8BJ37 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Tdp1Q8BJ37 Gm43060-201ENSMUST00000200621 289 ntBASIC22.7■■□□□ 1.22
Tdp1Q8BJ37 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Tdp1Q8BJ37 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Tdp1Q8BJ37 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Tdp1Q8BJ37 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Tdp1Q8BJ37 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Tdp1Q8BJ37 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tdp1Q8BJ37 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tdp1Q8BJ37 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tdp1Q8BJ37 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC22.69■■□□□ 1.22
Tdp1Q8BJ37 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
Tdp1Q8BJ37 Gm10209-201ENSMUST00000203397 1607 ntBASIC22.68■■□□□ 1.22
Tdp1Q8BJ37 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Tdp1Q8BJ37 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.68■■□□□ 1.22
Tdp1Q8BJ37 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Tdp1Q8BJ37 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
Tdp1Q8BJ37 Gm40848-201ENSMUST00000221998 324 ntBASIC22.67■■□□□ 1.22
Tdp1Q8BJ37 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Tdp1Q8BJ37 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Tdp1Q8BJ37 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
Tdp1Q8BJ37 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Tdp1Q8BJ37 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22.66■■□□□ 1.22
Tdp1Q8BJ37 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Tdp1Q8BJ37 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.66■■□□□ 1.22
Tdp1Q8BJ37 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Tdp1Q8BJ37 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Tdp1Q8BJ37 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Tdp1Q8BJ37 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Tdp1Q8BJ37 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Tdp1Q8BJ37 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Tdp1Q8BJ37 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tdp1Q8BJ37 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tdp1Q8BJ37 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.65■■□□□ 1.22
Tdp1Q8BJ37 Gm29257-201ENSMUST00000186115 639 ntBASIC22.65■■□□□ 1.22
Tdp1Q8BJ37 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tdp1Q8BJ37 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tdp1Q8BJ37 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tdp1Q8BJ37 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.65■■□□□ 1.22
Tdp1Q8BJ37 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC22.65■■□□□ 1.22
Tdp1Q8BJ37 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Tdp1Q8BJ37 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tdp1Q8BJ37 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tdp1Q8BJ37 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tdp1Q8BJ37 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.64■■□□□ 1.22
Tdp1Q8BJ37 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Tdp1Q8BJ37 Gm10493-201ENSMUST00000097270 612 ntBASIC22.64■■□□□ 1.21
Tdp1Q8BJ37 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Tdp1Q8BJ37 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Tdp1Q8BJ37 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Tdp1Q8BJ37 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Tdp1Q8BJ37 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC22.63■■□□□ 1.21
Tdp1Q8BJ37 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Tdp1Q8BJ37 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Tdp1Q8BJ37 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms