Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.91■□□□□ 0.46
Slc5a7Q8BGY9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc5a7Q8BGY9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc5a7Q8BGY9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc5a7Q8BGY9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Slc5a7Q8BGY9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc5a7Q8BGY9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc5a7Q8BGY9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc5a7Q8BGY9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.91■□□□□ 0.46
Slc5a7Q8BGY9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc5a7Q8BGY9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.91■□□□□ 0.46
Slc5a7Q8BGY9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Slc5a7Q8BGY9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Slc5a7Q8BGY9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Slc5a7Q8BGY9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc5a7Q8BGY9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Slc5a7Q8BGY9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc5a7Q8BGY9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc5a7Q8BGY9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc5a7Q8BGY9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc5a7Q8BGY9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc5a7Q8BGY9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.9■□□□□ 0.46
Slc5a7Q8BGY9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc5a7Q8BGY9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc5a7Q8BGY9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Slc5a7Q8BGY9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Slc5a7Q8BGY9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc5a7Q8BGY9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc5a7Q8BGY9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc5a7Q8BGY9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc5a7Q8BGY9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.89■□□□□ 0.45
Slc5a7Q8BGY9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Slc5a7Q8BGY9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc5a7Q8BGY9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc5a7Q8BGY9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Slc5a7Q8BGY9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc5a7Q8BGY9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc5a7Q8BGY9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Slc5a7Q8BGY9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.88■□□□□ 0.45
Slc5a7Q8BGY9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.88■□□□□ 0.45
Slc5a7Q8BGY9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc5a7Q8BGY9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Slc5a7Q8BGY9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Slc5a7Q8BGY9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Slc5a7Q8BGY9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Slc5a7Q8BGY9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Slc5a7Q8BGY9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.87■□□□□ 0.45
Slc5a7Q8BGY9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Slc5a7Q8BGY9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc5a7Q8BGY9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc5a7Q8BGY9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc5a7Q8BGY9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc5a7Q8BGY9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc5a7Q8BGY9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc5a7Q8BGY9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc5a7Q8BGY9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc5a7Q8BGY9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.86■□□□□ 0.45
Slc5a7Q8BGY9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc5a7Q8BGY9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.86■□□□□ 0.45
Slc5a7Q8BGY9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Slc5a7Q8BGY9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc5a7Q8BGY9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc5a7Q8BGY9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Slc5a7Q8BGY9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.86■□□□□ 0.45
Slc5a7Q8BGY9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc5a7Q8BGY9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc5a7Q8BGY9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc5a7Q8BGY9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc5a7Q8BGY9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc5a7Q8BGY9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.86■□□□□ 0.45
Slc5a7Q8BGY9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc5a7Q8BGY9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Slc5a7Q8BGY9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc5a7Q8BGY9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc5a7Q8BGY9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc5a7Q8BGY9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Slc5a7Q8BGY9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc5a7Q8BGY9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc5a7Q8BGY9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc5a7Q8BGY9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc5a7Q8BGY9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc5a7Q8BGY9 Gm11599-201ENSMUST00000118720 878 ntBASIC17.84■□□□□ 0.45
Slc5a7Q8BGY9 Gm7432-201ENSMUST00000210343 879 ntBASIC17.84■□□□□ 0.45
Slc5a7Q8BGY9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.84■□□□□ 0.45
Slc5a7Q8BGY9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc5a7Q8BGY9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc5a7Q8BGY9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Slc5a7Q8BGY9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.83■□□□□ 0.45
Slc5a7Q8BGY9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc5a7Q8BGY9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.83■□□□□ 0.44
Slc5a7Q8BGY9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.83■□□□□ 0.44
Slc5a7Q8BGY9 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.83■□□□□ 0.44
Slc5a7Q8BGY9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc5a7Q8BGY9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Slc5a7Q8BGY9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc5a7Q8BGY9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc5a7Q8BGY9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc5a7Q8BGY9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc5a7Q8BGY9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Slc5a7Q8BGY9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms