Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Samm50Q8BGH2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Samm50Q8BGH2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Samm50Q8BGH2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Samm50Q8BGH2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Samm50Q8BGH2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Samm50Q8BGH2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Samm50Q8BGH2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Samm50Q8BGH2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Samm50Q8BGH2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC23.86■■□□□ 1.41
Samm50Q8BGH2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC23.86■■□□□ 1.41
Samm50Q8BGH2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.85■■□□□ 1.41
Samm50Q8BGH2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC23.85■■□□□ 1.41
Samm50Q8BGH2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.84■■□□□ 1.41
Samm50Q8BGH2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Samm50Q8BGH2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Samm50Q8BGH2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Samm50Q8BGH2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Samm50Q8BGH2 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.84■■□□□ 1.41
Samm50Q8BGH2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC23.84■■□□□ 1.41
Samm50Q8BGH2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Samm50Q8BGH2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Samm50Q8BGH2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Samm50Q8BGH2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC23.83■■□□□ 1.41
Samm50Q8BGH2 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.83■■□□□ 1.41
Samm50Q8BGH2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Samm50Q8BGH2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Samm50Q8BGH2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Samm50Q8BGH2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Samm50Q8BGH2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Samm50Q8BGH2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Samm50Q8BGH2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Samm50Q8BGH2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Samm50Q8BGH2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Samm50Q8BGH2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC23.82■■□□□ 1.4
Samm50Q8BGH2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Samm50Q8BGH2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
Samm50Q8BGH2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Samm50Q8BGH2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Samm50Q8BGH2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Samm50Q8BGH2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Samm50Q8BGH2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Samm50Q8BGH2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Samm50Q8BGH2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Samm50Q8BGH2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Samm50Q8BGH2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Samm50Q8BGH2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Samm50Q8BGH2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Samm50Q8BGH2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.81■■□□□ 1.4
Samm50Q8BGH2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Samm50Q8BGH2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Samm50Q8BGH2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC23.81■■□□□ 1.4
Samm50Q8BGH2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC23.81■■□□□ 1.4
Samm50Q8BGH2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Samm50Q8BGH2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Samm50Q8BGH2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Samm50Q8BGH2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Samm50Q8BGH2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Samm50Q8BGH2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Samm50Q8BGH2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Samm50Q8BGH2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Samm50Q8BGH2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Samm50Q8BGH2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Samm50Q8BGH2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Samm50Q8BGH2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.79■■□□□ 1.4
Samm50Q8BGH2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Samm50Q8BGH2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.79■■□□□ 1.4
Samm50Q8BGH2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Samm50Q8BGH2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Samm50Q8BGH2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Samm50Q8BGH2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Samm50Q8BGH2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Samm50Q8BGH2 Gm7417-201ENSMUST00000192950 473 ntBASIC23.78■■□□□ 1.4
Samm50Q8BGH2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.78■■□□□ 1.4
Samm50Q8BGH2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
Samm50Q8BGH2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Samm50Q8BGH2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Samm50Q8BGH2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Samm50Q8BGH2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Samm50Q8BGH2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC23.77■■□□□ 1.4
Samm50Q8BGH2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Samm50Q8BGH2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Samm50Q8BGH2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
Samm50Q8BGH2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Samm50Q8BGH2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Samm50Q8BGH2 Gm10399-202ENSMUST00000202768 748 ntBASIC23.77■■□□□ 1.4
Samm50Q8BGH2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Samm50Q8BGH2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Samm50Q8BGH2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Samm50Q8BGH2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.76■■□□□ 1.39
Samm50Q8BGH2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.76■■□□□ 1.39
Samm50Q8BGH2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Samm50Q8BGH2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Samm50Q8BGH2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Samm50Q8BGH2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Samm50Q8BGH2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Samm50Q8BGH2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Samm50Q8BGH2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Samm50Q8BGH2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Samm50Q8BGH2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms