Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim50Q810I2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim50Q810I2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim50Q810I2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trim50Q810I2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim50Q810I2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim50Q810I2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim50Q810I2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim50Q810I2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim50Q810I2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim50Q810I2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim50Q810I2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim50Q810I2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim50Q810I2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.89■□□□□ 0.77
Trim50Q810I2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim50Q810I2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim50Q810I2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim50Q810I2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim50Q810I2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.88■□□□□ 0.77
Trim50Q810I2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim50Q810I2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim50Q810I2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim50Q810I2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim50Q810I2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim50Q810I2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim50Q810I2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim50Q810I2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim50Q810I2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim50Q810I2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim50Q810I2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim50Q810I2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.87■□□□□ 0.77
Trim50Q810I2 Gm45102-201ENSMUST00000207427 857 ntBASIC19.87■□□□□ 0.77
Trim50Q810I2 Rps24-207ENSMUST00000224568 714 ntBASIC19.87■□□□□ 0.77
Trim50Q810I2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.87■□□□□ 0.77
Trim50Q810I2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim50Q810I2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim50Q810I2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim50Q810I2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim50Q810I2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim50Q810I2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim50Q810I2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.85■□□□□ 0.77
Trim50Q810I2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.85■□□□□ 0.77
Trim50Q810I2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim50Q810I2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim50Q810I2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim50Q810I2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Trim50Q810I2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
Trim50Q810I2 Gm14117-201ENSMUST00000122417 843 ntBASIC19.84■□□□□ 0.77
Trim50Q810I2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim50Q810I2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim50Q810I2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Trim50Q810I2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim50Q810I2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim50Q810I2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim50Q810I2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim50Q810I2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.84■□□□□ 0.77
Trim50Q810I2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim50Q810I2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim50Q810I2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Trim50Q810I2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim50Q810I2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Trim50Q810I2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim50Q810I2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim50Q810I2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim50Q810I2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim50Q810I2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim50Q810I2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trim50Q810I2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim50Q810I2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Trim50Q810I2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.83■□□□□ 0.76
Trim50Q810I2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Trim50Q810I2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim50Q810I2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim50Q810I2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim50Q810I2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.82■□□□□ 0.76
Trim50Q810I2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim50Q810I2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.82■□□□□ 0.76
Trim50Q810I2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim50Q810I2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim50Q810I2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim50Q810I2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim50Q810I2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.81■□□□□ 0.76
Trim50Q810I2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim50Q810I2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim50Q810I2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim50Q810I2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim50Q810I2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim50Q810I2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim50Q810I2 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.81■□□□□ 0.76
Trim50Q810I2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim50Q810I2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim50Q810I2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Trim50Q810I2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim50Q810I2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim50Q810I2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim50Q810I2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.8■□□□□ 0.76
Trim50Q810I2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim50Q810I2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim50Q810I2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim50Q810I2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms