Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Nrde2Q80XC6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nrde2Q80XC6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nrde2Q80XC6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Nrde2Q80XC6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.69■□□□□ 0.9
Nrde2Q80XC6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Nrde2Q80XC6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Nrde2Q80XC6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nrde2Q80XC6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nrde2Q80XC6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.69■□□□□ 0.9
Nrde2Q80XC6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Nrde2Q80XC6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
Nrde2Q80XC6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nrde2Q80XC6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nrde2Q80XC6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nrde2Q80XC6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nrde2Q80XC6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nrde2Q80XC6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Nrde2Q80XC6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nrde2Q80XC6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nrde2Q80XC6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nrde2Q80XC6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nrde2Q80XC6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Nrde2Q80XC6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nrde2Q80XC6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nrde2Q80XC6 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.67■□□□□ 0.9
Nrde2Q80XC6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nrde2Q80XC6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nrde2Q80XC6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nrde2Q80XC6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nrde2Q80XC6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nrde2Q80XC6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nrde2Q80XC6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nrde2Q80XC6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nrde2Q80XC6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nrde2Q80XC6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Nrde2Q80XC6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nrde2Q80XC6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nrde2Q80XC6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Nrde2Q80XC6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
Nrde2Q80XC6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.64■□□□□ 0.89
Nrde2Q80XC6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nrde2Q80XC6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nrde2Q80XC6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.64■□□□□ 0.89
Nrde2Q80XC6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.64■□□□□ 0.89
Nrde2Q80XC6 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.64■□□□□ 0.89
Nrde2Q80XC6 Gm5874-201ENSMUST00000096101 508 ntBASIC20.64■□□□□ 0.89
Nrde2Q80XC6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nrde2Q80XC6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nrde2Q80XC6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nrde2Q80XC6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nrde2Q80XC6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.63■□□□□ 0.89
Nrde2Q80XC6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nrde2Q80XC6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nrde2Q80XC6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nrde2Q80XC6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.63■□□□□ 0.89
Nrde2Q80XC6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nrde2Q80XC6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nrde2Q80XC6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nrde2Q80XC6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nrde2Q80XC6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nrde2Q80XC6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Nrde2Q80XC6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nrde2Q80XC6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nrde2Q80XC6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Nrde2Q80XC6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
Nrde2Q80XC6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nrde2Q80XC6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Nrde2Q80XC6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nrde2Q80XC6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.61■□□□□ 0.89
Nrde2Q80XC6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nrde2Q80XC6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nrde2Q80XC6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nrde2Q80XC6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Nrde2Q80XC6 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.61■□□□□ 0.89
Nrde2Q80XC6 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.61■□□□□ 0.89
Nrde2Q80XC6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Nrde2Q80XC6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.61■□□□□ 0.89
Nrde2Q80XC6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nrde2Q80XC6 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.61■□□□□ 0.89
Nrde2Q80XC6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.6■□□□□ 0.89
Nrde2Q80XC6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.6■□□□□ 0.89
Nrde2Q80XC6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nrde2Q80XC6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nrde2Q80XC6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nrde2Q80XC6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nrde2Q80XC6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nrde2Q80XC6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nrde2Q80XC6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nrde2Q80XC6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nrde2Q80XC6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nrde2Q80XC6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nrde2Q80XC6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Nrde2Q80XC6 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.59■□□□□ 0.89
Nrde2Q80XC6 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.59■□□□□ 0.89
Nrde2Q80XC6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nrde2Q80XC6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Nrde2Q80XC6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nrde2Q80XC6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Nrde2Q80XC6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms