Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc116Q80X53 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.06■□□□□ 0.8
Ccdc116Q80X53 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ccdc116Q80X53 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ccdc116Q80X53 Gm10399-202ENSMUST00000202768 748 ntBASIC20.06■□□□□ 0.8
Ccdc116Q80X53 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ccdc116Q80X53 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc116Q80X53 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc116Q80X53 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc116Q80X53 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc116Q80X53 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc116Q80X53 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc116Q80X53 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc116Q80X53 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc116Q80X53 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc116Q80X53 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ccdc116Q80X53 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc116Q80X53 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc116Q80X53 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc116Q80X53 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc116Q80X53 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc116Q80X53 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc116Q80X53 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc116Q80X53 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.03■□□□□ 0.8
Ccdc116Q80X53 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc116Q80X53 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.03■□□□□ 0.8
Ccdc116Q80X53 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.03■□□□□ 0.8
Ccdc116Q80X53 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc116Q80X53 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc116Q80X53 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc116Q80X53 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc116Q80X53 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc116Q80X53 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc116Q80X53 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc116Q80X53 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc116Q80X53 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc116Q80X53 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc116Q80X53 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc116Q80X53 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc116Q80X53 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc116Q80X53 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc116Q80X53 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Ccdc116Q80X53 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc116Q80X53 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc116Q80X53 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20■□□□□ 0.79
Ccdc116Q80X53 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc116Q80X53 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc116Q80X53 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc116Q80X53 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20■□□□□ 0.79
Ccdc116Q80X53 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc116Q80X53 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ccdc116Q80X53 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc116Q80X53 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.99■□□□□ 0.79
Ccdc116Q80X53 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc116Q80X53 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc116Q80X53 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc116Q80X53 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc116Q80X53 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc116Q80X53 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc116Q80X53 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc116Q80X53 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc116Q80X53 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Ccdc116Q80X53 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc116Q80X53 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.98■□□□□ 0.79
Ccdc116Q80X53 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.98■□□□□ 0.79
Ccdc116Q80X53 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc116Q80X53 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc116Q80X53 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc116Q80X53 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc116Q80X53 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc116Q80X53 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc116Q80X53 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc116Q80X53 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc116Q80X53 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.97■□□□□ 0.79
Ccdc116Q80X53 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.97■□□□□ 0.79
Ccdc116Q80X53 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc116Q80X53 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc116Q80X53 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc116Q80X53 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc116Q80X53 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ccdc116Q80X53 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc116Q80X53 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc116Q80X53 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc116Q80X53 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ccdc116Q80X53 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc116Q80X53 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.96■□□□□ 0.79
Ccdc116Q80X53 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ccdc116Q80X53 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc116Q80X53 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc116Q80X53 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.96■□□□□ 0.79
Ccdc116Q80X53 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Ccdc116Q80X53 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc116Q80X53 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ccdc116Q80X53 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc116Q80X53 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ccdc116Q80X53 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc116Q80X53 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc116Q80X53 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc116Q80X53 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc116Q80X53 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms