Protein–RNA interactions for Protein: Q80U56

Avl9, Late secretory pathway protein AVL9 homolog, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Avl9Q80U56 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Avl9Q80U56 Gm45417-201ENSMUST00000209533 758 ntBASIC19.75■□□□□ 0.75
Avl9Q80U56 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Avl9Q80U56 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
Avl9Q80U56 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.75■□□□□ 0.75
Avl9Q80U56 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Avl9Q80U56 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Avl9Q80U56 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Avl9Q80U56 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Avl9Q80U56 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Avl9Q80U56 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Avl9Q80U56 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Avl9Q80U56 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.74■□□□□ 0.75
Avl9Q80U56 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.74■□□□□ 0.75
Avl9Q80U56 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Avl9Q80U56 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Avl9Q80U56 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Avl9Q80U56 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Avl9Q80U56 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Avl9Q80U56 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Avl9Q80U56 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.73■□□□□ 0.75
Avl9Q80U56 Gm43530-201ENSMUST00000195920 274 ntBASIC19.73■□□□□ 0.75
Avl9Q80U56 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Avl9Q80U56 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Avl9Q80U56 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Avl9Q80U56 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Avl9Q80U56 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Avl9Q80U56 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Avl9Q80U56 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Avl9Q80U56 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.72■□□□□ 0.75
Avl9Q80U56 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Avl9Q80U56 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.72■□□□□ 0.75
Avl9Q80U56 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Avl9Q80U56 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.72■□□□□ 0.75
Avl9Q80U56 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.72■□□□□ 0.75
Avl9Q80U56 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Avl9Q80U56 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Avl9Q80U56 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Avl9Q80U56 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Avl9Q80U56 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Avl9Q80U56 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Avl9Q80U56 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.71■□□□□ 0.75
Avl9Q80U56 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Avl9Q80U56 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Avl9Q80U56 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Avl9Q80U56 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Avl9Q80U56 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Avl9Q80U56 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Avl9Q80U56 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Avl9Q80U56 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Avl9Q80U56 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.7■□□□□ 0.74
Avl9Q80U56 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.7■□□□□ 0.74
Avl9Q80U56 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Avl9Q80U56 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Avl9Q80U56 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Avl9Q80U56 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Avl9Q80U56 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Avl9Q80U56 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.69■□□□□ 0.74
Avl9Q80U56 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Avl9Q80U56 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Avl9Q80U56 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.69■□□□□ 0.74
Avl9Q80U56 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Avl9Q80U56 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Avl9Q80U56 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.68■□□□□ 0.74
Avl9Q80U56 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Avl9Q80U56 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Avl9Q80U56 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Avl9Q80U56 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Avl9Q80U56 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Avl9Q80U56 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Avl9Q80U56 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Avl9Q80U56 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Avl9Q80U56 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Avl9Q80U56 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
Avl9Q80U56 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.68■□□□□ 0.74
Avl9Q80U56 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Avl9Q80U56 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Avl9Q80U56 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Avl9Q80U56 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Avl9Q80U56 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Avl9Q80U56 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Avl9Q80U56 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Avl9Q80U56 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Avl9Q80U56 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Avl9Q80U56 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Avl9Q80U56 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.66■□□□□ 0.74
Avl9Q80U56 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Avl9Q80U56 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Avl9Q80U56 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Avl9Q80U56 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Avl9Q80U56 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Avl9Q80U56 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Avl9Q80U56 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Avl9Q80U56 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Avl9Q80U56 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Avl9Q80U56 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Avl9Q80U56 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Avl9Q80U56 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Avl9Q80U56 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Avl9Q80U56 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms