Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.35■■□□□ 1.17
Sh3d21Q7TSG5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.34■■□□□ 1.17
Sh3d21Q7TSG5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Sh3d21Q7TSG5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3d21Q7TSG5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3d21Q7TSG5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Sh3d21Q7TSG5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sh3d21Q7TSG5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sh3d21Q7TSG5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sh3d21Q7TSG5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sh3d21Q7TSG5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Sh3d21Q7TSG5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Sh3d21Q7TSG5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sh3d21Q7TSG5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sh3d21Q7TSG5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.32■■□□□ 1.16
Sh3d21Q7TSG5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3d21Q7TSG5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.32■■□□□ 1.16
Sh3d21Q7TSG5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3d21Q7TSG5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3d21Q7TSG5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3d21Q7TSG5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3d21Q7TSG5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.31■■□□□ 1.16
Sh3d21Q7TSG5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3d21Q7TSG5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3d21Q7TSG5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3d21Q7TSG5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3d21Q7TSG5 Rps24-207ENSMUST00000224568 714 ntBASIC22.31■■□□□ 1.16
Sh3d21Q7TSG5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3d21Q7TSG5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC22.3■■□□□ 1.16
Sh3d21Q7TSG5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3d21Q7TSG5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3d21Q7TSG5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sh3d21Q7TSG5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sh3d21Q7TSG5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.29■■□□□ 1.16
Sh3d21Q7TSG5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sh3d21Q7TSG5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Sh3d21Q7TSG5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sh3d21Q7TSG5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sh3d21Q7TSG5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sh3d21Q7TSG5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sh3d21Q7TSG5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.28■■□□□ 1.16
Sh3d21Q7TSG5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sh3d21Q7TSG5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3d21Q7TSG5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Sh3d21Q7TSG5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3d21Q7TSG5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.27■■□□□ 1.16
Sh3d21Q7TSG5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3d21Q7TSG5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3d21Q7TSG5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3d21Q7TSG5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3d21Q7TSG5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3d21Q7TSG5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3d21Q7TSG5 Gm14117-201ENSMUST00000122417 843 ntBASIC22.26■■□□□ 1.15
Sh3d21Q7TSG5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3d21Q7TSG5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3d21Q7TSG5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Sh3d21Q7TSG5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3d21Q7TSG5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Sh3d21Q7TSG5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sh3d21Q7TSG5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.25■■□□□ 1.15
Sh3d21Q7TSG5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sh3d21Q7TSG5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sh3d21Q7TSG5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sh3d21Q7TSG5 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.25■■□□□ 1.15
Sh3d21Q7TSG5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.25■■□□□ 1.15
Sh3d21Q7TSG5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sh3d21Q7TSG5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sh3d21Q7TSG5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.24■■□□□ 1.15
Sh3d21Q7TSG5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sh3d21Q7TSG5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sh3d21Q7TSG5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sh3d21Q7TSG5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sh3d21Q7TSG5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sh3d21Q7TSG5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3d21Q7TSG5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.23■■□□□ 1.15
Sh3d21Q7TSG5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3d21Q7TSG5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3d21Q7TSG5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.23■■□□□ 1.15
Sh3d21Q7TSG5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Sh3d21Q7TSG5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Sh3d21Q7TSG5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3d21Q7TSG5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3d21Q7TSG5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.23■■□□□ 1.15
Sh3d21Q7TSG5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3d21Q7TSG5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sh3d21Q7TSG5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sh3d21Q7TSG5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Sh3d21Q7TSG5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.22■■□□□ 1.15
Sh3d21Q7TSG5 Gm45102-201ENSMUST00000207427 857 ntBASIC22.22■■□□□ 1.15
Sh3d21Q7TSG5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.22■■□□□ 1.15
Sh3d21Q7TSG5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sh3d21Q7TSG5 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sh3d21Q7TSG5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sh3d21Q7TSG5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Sh3d21Q7TSG5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sh3d21Q7TSG5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sh3d21Q7TSG5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sh3d21Q7TSG5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Sh3d21Q7TSG5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sh3d21Q7TSG5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms