Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Exosc3Q7TQK4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Exosc3Q7TQK4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.82■□□□□ 0.6
Exosc3Q7TQK4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Exosc3Q7TQK4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.82■□□□□ 0.6
Exosc3Q7TQK4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Exosc3Q7TQK4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Exosc3Q7TQK4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Exosc3Q7TQK4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Exosc3Q7TQK4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Exosc3Q7TQK4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Exosc3Q7TQK4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Exosc3Q7TQK4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Exosc3Q7TQK4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Exosc3Q7TQK4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Exosc3Q7TQK4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Exosc3Q7TQK4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.81■□□□□ 0.6
Exosc3Q7TQK4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.81■□□□□ 0.6
Exosc3Q7TQK4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Exosc3Q7TQK4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Exosc3Q7TQK4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Exosc3Q7TQK4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Exosc3Q7TQK4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.8■□□□□ 0.6
Exosc3Q7TQK4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.8■□□□□ 0.6
Exosc3Q7TQK4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Exosc3Q7TQK4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
Exosc3Q7TQK4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Exosc3Q7TQK4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Exosc3Q7TQK4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Exosc3Q7TQK4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Exosc3Q7TQK4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Exosc3Q7TQK4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Exosc3Q7TQK4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Exosc3Q7TQK4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Exosc3Q7TQK4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Exosc3Q7TQK4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Exosc3Q7TQK4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Exosc3Q7TQK4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Exosc3Q7TQK4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Exosc3Q7TQK4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Exosc3Q7TQK4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Exosc3Q7TQK4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.78■□□□□ 0.6
Exosc3Q7TQK4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Exosc3Q7TQK4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Exosc3Q7TQK4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.78■□□□□ 0.6
Exosc3Q7TQK4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Exosc3Q7TQK4 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.78■□□□□ 0.6
Exosc3Q7TQK4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Exosc3Q7TQK4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Exosc3Q7TQK4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Exosc3Q7TQK4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Exosc3Q7TQK4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Exosc3Q7TQK4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Exosc3Q7TQK4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Exosc3Q7TQK4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Exosc3Q7TQK4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Exosc3Q7TQK4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Exosc3Q7TQK4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
Exosc3Q7TQK4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Exosc3Q7TQK4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Exosc3Q7TQK4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.59
Exosc3Q7TQK4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Exosc3Q7TQK4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Exosc3Q7TQK4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Exosc3Q7TQK4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Exosc3Q7TQK4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Exosc3Q7TQK4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.76■□□□□ 0.59
Exosc3Q7TQK4 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.76■□□□□ 0.59
Exosc3Q7TQK4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Exosc3Q7TQK4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Exosc3Q7TQK4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
Exosc3Q7TQK4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Exosc3Q7TQK4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Exosc3Q7TQK4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Exosc3Q7TQK4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Exosc3Q7TQK4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Exosc3Q7TQK4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.75■□□□□ 0.59
Exosc3Q7TQK4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Exosc3Q7TQK4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.75■□□□□ 0.59
Exosc3Q7TQK4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Exosc3Q7TQK4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Exosc3Q7TQK4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Exosc3Q7TQK4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.74■□□□□ 0.59
Exosc3Q7TQK4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Exosc3Q7TQK4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Exosc3Q7TQK4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Exosc3Q7TQK4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Exosc3Q7TQK4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Exosc3Q7TQK4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.74■□□□□ 0.59
Exosc3Q7TQK4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Exosc3Q7TQK4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Exosc3Q7TQK4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Exosc3Q7TQK4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Exosc3Q7TQK4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
Exosc3Q7TQK4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Exosc3Q7TQK4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Exosc3Q7TQK4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.73■□□□□ 0.59
Exosc3Q7TQK4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Exosc3Q7TQK4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Exosc3Q7TQK4 Gm12922-201ENSMUST00000120626 809 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms