Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.9■□□□□ 0.78
Scn4bQ7M729 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn4bQ7M729 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn4bQ7M729 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn4bQ7M729 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn4bQ7M729 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.9■□□□□ 0.78
Scn4bQ7M729 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn4bQ7M729 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn4bQ7M729 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn4bQ7M729 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scn4bQ7M729 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scn4bQ7M729 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.89■□□□□ 0.77
Scn4bQ7M729 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scn4bQ7M729 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Scn4bQ7M729 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Scn4bQ7M729 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn4bQ7M729 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn4bQ7M729 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.89■□□□□ 0.77
Scn4bQ7M729 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Scn4bQ7M729 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn4bQ7M729 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Scn4bQ7M729 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn4bQ7M729 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Scn4bQ7M729 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4bQ7M729 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4bQ7M729 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.87■□□□□ 0.77
Scn4bQ7M729 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4bQ7M729 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4bQ7M729 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4bQ7M729 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4bQ7M729 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4bQ7M729 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4bQ7M729 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4bQ7M729 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4bQ7M729 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.86■□□□□ 0.77
Scn4bQ7M729 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.86■□□□□ 0.77
Scn4bQ7M729 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.86■□□□□ 0.77
Scn4bQ7M729 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4bQ7M729 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4bQ7M729 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Scn4bQ7M729 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4bQ7M729 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn4bQ7M729 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn4bQ7M729 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.85■□□□□ 0.77
Scn4bQ7M729 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.85■□□□□ 0.77
Scn4bQ7M729 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn4bQ7M729 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn4bQ7M729 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.85■□□□□ 0.77
Scn4bQ7M729 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn4bQ7M729 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Scn4bQ7M729 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.84■□□□□ 0.77
Scn4bQ7M729 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.84■□□□□ 0.77
Scn4bQ7M729 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.84■□□□□ 0.77
Scn4bQ7M729 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn4bQ7M729 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn4bQ7M729 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.84■□□□□ 0.77
Scn4bQ7M729 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn4bQ7M729 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.84■□□□□ 0.77
Scn4bQ7M729 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn4bQ7M729 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn4bQ7M729 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn4bQ7M729 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Scn4bQ7M729 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
Scn4bQ7M729 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Scn4bQ7M729 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn4bQ7M729 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn4bQ7M729 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn4bQ7M729 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Scn4bQ7M729 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.83■□□□□ 0.77
Scn4bQ7M729 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn4bQ7M729 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn4bQ7M729 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn4bQ7M729 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn4bQ7M729 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn4bQ7M729 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Scn4bQ7M729 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Scn4bQ7M729 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn4bQ7M729 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Scn4bQ7M729 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Scn4bQ7M729 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.82■□□□□ 0.76
Scn4bQ7M729 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn4bQ7M729 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.82■□□□□ 0.76
Scn4bQ7M729 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn4bQ7M729 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Scn4bQ7M729 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn4bQ7M729 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn4bQ7M729 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn4bQ7M729 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Scn4bQ7M729 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn4bQ7M729 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn4bQ7M729 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn4bQ7M729 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn4bQ7M729 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn4bQ7M729 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Scn4bQ7M729 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn4bQ7M729 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn4bQ7M729 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn4bQ7M729 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scn4bQ7M729 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn4bQ7M729 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms