Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Ubfd1Q78JW9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ubfd1Q78JW9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.79
Ubfd1Q78JW9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubfd1Q78JW9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubfd1Q78JW9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.94■□□□□ 0.78
Ubfd1Q78JW9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ubfd1Q78JW9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.94■□□□□ 0.78
Ubfd1Q78JW9 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.94■□□□□ 0.78
Ubfd1Q78JW9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Ubfd1Q78JW9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Ubfd1Q78JW9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubfd1Q78JW9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubfd1Q78JW9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Ubfd1Q78JW9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.93■□□□□ 0.78
Ubfd1Q78JW9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubfd1Q78JW9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubfd1Q78JW9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Serp2-204ENSMUST00000228055 705 ntBASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ubfd1Q78JW9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ubfd1Q78JW9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.9■□□□□ 0.78
Ubfd1Q78JW9 Mir7075-201ENSMUST00000184187 82 ntBASIC19.9■□□□□ 0.78
Ubfd1Q78JW9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.9■□□□□ 0.78
Ubfd1Q78JW9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubfd1Q78JW9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubfd1Q78JW9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
Ubfd1Q78JW9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ubfd1Q78JW9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Ubfd1Q78JW9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.89■□□□□ 0.77
Ubfd1Q78JW9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubfd1Q78JW9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubfd1Q78JW9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubfd1Q78JW9 Gm6139-201ENSMUST00000079261 882 ntBASIC19.89■□□□□ 0.77
Ubfd1Q78JW9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubfd1Q78JW9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ubfd1Q78JW9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.86■□□□□ 0.77
Ubfd1Q78JW9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubfd1Q78JW9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ubfd1Q78JW9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.85■□□□□ 0.77
Ubfd1Q78JW9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.85■□□□□ 0.77
Ubfd1Q78JW9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
Ubfd1Q78JW9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubfd1Q78JW9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.85■□□□□ 0.77
Ubfd1Q78JW9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ubfd1Q78JW9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms