Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Ubfd1Q78JW9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ubfd1Q78JW9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.79
Ubfd1Q78JW9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubfd1Q78JW9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubfd1Q78JW9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubfd1Q78JW9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.94■□□□□ 0.78
Ubfd1Q78JW9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ubfd1Q78JW9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.94■□□□□ 0.78
Ubfd1Q78JW9 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.94■□□□□ 0.78
Ubfd1Q78JW9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Ubfd1Q78JW9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Ubfd1Q78JW9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubfd1Q78JW9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubfd1Q78JW9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Ubfd1Q78JW9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.93■□□□□ 0.78
Ubfd1Q78JW9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubfd1Q78JW9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubfd1Q78JW9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Serp2-204ENSMUST00000228055 705 ntBASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubfd1Q78JW9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubfd1Q78JW9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ubfd1Q78JW9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ubfd1Q78JW9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.9■□□□□ 0.78
Ubfd1Q78JW9 Mir7075-201ENSMUST00000184187 82 ntBASIC19.9■□□□□ 0.78
Ubfd1Q78JW9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.9■□□□□ 0.78
Ubfd1Q78JW9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubfd1Q78JW9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubfd1Q78JW9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
Ubfd1Q78JW9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ubfd1Q78JW9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Ubfd1Q78JW9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.89■□□□□ 0.77
Ubfd1Q78JW9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubfd1Q78JW9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubfd1Q78JW9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubfd1Q78JW9 Gm6139-201ENSMUST00000079261 882 ntBASIC19.89■□□□□ 0.77
Ubfd1Q78JW9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubfd1Q78JW9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ubfd1Q78JW9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubfd1Q78JW9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ubfd1Q78JW9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.86■□□□□ 0.77
Ubfd1Q78JW9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubfd1Q78JW9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ubfd1Q78JW9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.85■□□□□ 0.77
Ubfd1Q78JW9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.85■□□□□ 0.77
Ubfd1Q78JW9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
Ubfd1Q78JW9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubfd1Q78JW9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.85■□□□□ 0.77
Ubfd1Q78JW9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ubfd1Q78JW9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms