Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cspg5Q71M36 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
Cspg5Q71M36 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cspg5Q71M36 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cspg5Q71M36 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.05■□□□□ 0.96
Cspg5Q71M36 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cspg5Q71M36 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cspg5Q71M36 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.04■□□□□ 0.96
Cspg5Q71M36 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cspg5Q71M36 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cspg5Q71M36 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cspg5Q71M36 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Cspg5Q71M36 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cspg5Q71M36 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Cspg5Q71M36 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Cspg5Q71M36 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cspg5Q71M36 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cspg5Q71M36 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.03■□□□□ 0.96
Cspg5Q71M36 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cspg5Q71M36 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cspg5Q71M36 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.03■□□□□ 0.96
Cspg5Q71M36 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cspg5Q71M36 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.03■□□□□ 0.96
Cspg5Q71M36 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.03■□□□□ 0.96
Cspg5Q71M36 Gm9870-201ENSMUST00000063874 645 ntBASIC21.03■□□□□ 0.96
Cspg5Q71M36 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cspg5Q71M36 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Cspg5Q71M36 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cspg5Q71M36 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Cspg5Q71M36 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cspg5Q71M36 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.02■□□□□ 0.96
Cspg5Q71M36 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Cspg5Q71M36 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cspg5Q71M36 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cspg5Q71M36 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Cspg5Q71M36 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cspg5Q71M36 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cspg5Q71M36 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cspg5Q71M36 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cspg5Q71M36 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cspg5Q71M36 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cspg5Q71M36 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
Cspg5Q71M36 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.01■□□□□ 0.95
Cspg5Q71M36 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cspg5Q71M36 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cspg5Q71M36 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cspg5Q71M36 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.01■□□□□ 0.95
Cspg5Q71M36 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cspg5Q71M36 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cspg5Q71M36 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cspg5Q71M36 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cspg5Q71M36 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Cspg5Q71M36 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cspg5Q71M36 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cspg5Q71M36 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cspg5Q71M36 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cspg5Q71M36 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cspg5Q71M36 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cspg5Q71M36 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cspg5Q71M36 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cspg5Q71M36 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cspg5Q71M36 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cspg5Q71M36 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cspg5Q71M36 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cspg5Q71M36 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cspg5Q71M36 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
Cspg5Q71M36 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cspg5Q71M36 Gm8493-201ENSMUST00000196881 489 ntBASIC20.98■□□□□ 0.95
Cspg5Q71M36 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.98■□□□□ 0.95
Cspg5Q71M36 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.98■□□□□ 0.95
Cspg5Q71M36 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cspg5Q71M36 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cspg5Q71M36 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cspg5Q71M36 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cspg5Q71M36 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Cspg5Q71M36 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.97■□□□□ 0.95
Cspg5Q71M36 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cspg5Q71M36 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cspg5Q71M36 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cspg5Q71M36 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cspg5Q71M36 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cspg5Q71M36 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cspg5Q71M36 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cspg5Q71M36 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Cspg5Q71M36 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cspg5Q71M36 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
Cspg5Q71M36 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cspg5Q71M36 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cspg5Q71M36 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Cspg5Q71M36 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Cspg5Q71M36 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Cspg5Q71M36 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cspg5Q71M36 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cspg5Q71M36 Gm5874-201ENSMUST00000096101 508 ntBASIC20.95■□□□□ 0.94
Cspg5Q71M36 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cspg5Q71M36 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cspg5Q71M36 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cspg5Q71M36 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cspg5Q71M36 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Cspg5Q71M36 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms