Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RfflQ6ZQM0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RfflQ6ZQM0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RfflQ6ZQM0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RfflQ6ZQM0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RfflQ6ZQM0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RfflQ6ZQM0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RfflQ6ZQM0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.83■□□□□ 0.76
RfflQ6ZQM0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RfflQ6ZQM0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
RfflQ6ZQM0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
RfflQ6ZQM0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RfflQ6ZQM0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
RfflQ6ZQM0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.82■□□□□ 0.76
RfflQ6ZQM0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RfflQ6ZQM0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RfflQ6ZQM0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RfflQ6ZQM0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RfflQ6ZQM0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RfflQ6ZQM0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RfflQ6ZQM0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RfflQ6ZQM0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RfflQ6ZQM0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RfflQ6ZQM0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RfflQ6ZQM0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RfflQ6ZQM0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RfflQ6ZQM0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RfflQ6ZQM0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RfflQ6ZQM0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RfflQ6ZQM0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RfflQ6ZQM0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RfflQ6ZQM0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RfflQ6ZQM0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RfflQ6ZQM0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.8■□□□□ 0.76
RfflQ6ZQM0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.8■□□□□ 0.76
RfflQ6ZQM0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RfflQ6ZQM0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RfflQ6ZQM0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RfflQ6ZQM0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
RfflQ6ZQM0 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.79■□□□□ 0.76
RfflQ6ZQM0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RfflQ6ZQM0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RfflQ6ZQM0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.79■□□□□ 0.76
RfflQ6ZQM0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RfflQ6ZQM0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.79■□□□□ 0.76
RfflQ6ZQM0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RfflQ6ZQM0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RfflQ6ZQM0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RfflQ6ZQM0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RfflQ6ZQM0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RfflQ6ZQM0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RfflQ6ZQM0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RfflQ6ZQM0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.78■□□□□ 0.76
RfflQ6ZQM0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RfflQ6ZQM0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RfflQ6ZQM0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RfflQ6ZQM0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RfflQ6ZQM0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RfflQ6ZQM0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RfflQ6ZQM0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RfflQ6ZQM0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RfflQ6ZQM0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RfflQ6ZQM0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RfflQ6ZQM0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RfflQ6ZQM0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
RfflQ6ZQM0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RfflQ6ZQM0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RfflQ6ZQM0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RfflQ6ZQM0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RfflQ6ZQM0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RfflQ6ZQM0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RfflQ6ZQM0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.75■□□□□ 0.75
RfflQ6ZQM0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.75■□□□□ 0.75
RfflQ6ZQM0 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.75■□□□□ 0.75
RfflQ6ZQM0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RfflQ6ZQM0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RfflQ6ZQM0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
RfflQ6ZQM0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RfflQ6ZQM0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RfflQ6ZQM0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RfflQ6ZQM0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RfflQ6ZQM0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.74■□□□□ 0.75
RfflQ6ZQM0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.74■□□□□ 0.75
RfflQ6ZQM0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RfflQ6ZQM0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RfflQ6ZQM0 Gm11599-201ENSMUST00000118720 878 ntBASIC19.74■□□□□ 0.75
RfflQ6ZQM0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RfflQ6ZQM0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RfflQ6ZQM0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RfflQ6ZQM0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RfflQ6ZQM0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RfflQ6ZQM0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.73■□□□□ 0.75
RfflQ6ZQM0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RfflQ6ZQM0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
RfflQ6ZQM0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RfflQ6ZQM0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RfflQ6ZQM0 Gm7432-201ENSMUST00000210343 879 ntBASIC19.73■□□□□ 0.75
RfflQ6ZQM0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RfflQ6ZQM0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RfflQ6ZQM0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms